CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011552
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Chromatin structure-remodeling complex protein RSC58 
Protein Synonyms/Alias
 Remodel the structure of chromatin complex subunit 58 
Gene Name
 RSC58 
Gene Synonyms/Alias
 YLR033W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
154NIKSRSGKLLSGNEMacetylation[1]
322GYMDLYEKNEKKVKQsumoylation[2]
328EKNEKKVKQEELLNTsumoylation[2]
437RKERILNKVLKPTTEubiquitination[3]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Identification of sumoylated proteins by systematic immunoprecipitation of the budding yeast proteome.
 Wykoff DD, O'Shea EK.
 Mol Cell Proteomics. 2005 Jan;4(1):73-83. [PMID: 15596868]
 [3] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Component of the chromatin structure-remodeling complex (RSC), which is involved in transcription regulation and nucleosome positioning. RSC is responsible for the transfer of a histone octamer from a nucleosome core particle to naked DNA. The reaction requires ATP and involves an activated RSC-nucleosome intermediate. Remodeling reaction also involves DNA translocation, DNA twist and conformational change. As a reconfigurer of centromeric and flanking nucleosomes, RSC complex is required both for proper kinetochore function in chromosome segregation and, via a PKC1-dependent signaling pathway, for organization of the cellular cytoskeleton. 
Sequence Annotation
  
Keyword
 Chromatin regulator; Complete proteome; Nucleus; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 502 AA 
Protein Sequence
MTESVGGNKL VDFLVNVQSI LNAASVKCHV VDESFPAKFF EKNPDKIYES YCKFIKNRSN 60
SEGLIRNEDK LVLTTINKRF ENGEYEPIQG GFYKLYHDIK LVCTILIHFY PQGTRNYQLV 120
DKFYKFSSEL LLRECCRIGI ALTQTNNIKS RSGKLLSGNE MDEYDDDDAT ELDKIISYDF 180
IKISMNYTVP ISQTYQIRTK DMDLFSSIIS KSNLDKRPHE LPNTNFKINN VLPQTDIENE 240
APRLGFVGAN TSNIPDPTLP PTEMMTRFLH PNWYALPTTV WLKYGNYNSW APSFNENGTV 300
VDSTTRGLIW LERIGYMDLY EKNEKKVKQE ELLNTNEEGI NRKQNDENNK NVDGKSNGVQ 360
DDGGDNDNDA TIASANSEST ENKEQFIIKL QNLYNWTPSN YIGDDEIENF RNGTPDKLVS 420
DSLLKLKRLR KERILNKVLK PTTEERELYF KVKRILKEVI LAKKVSKVPI NNVRAFPVLQ 480
TNYNGSIPVV RAQPGRKRKH KK 502 
Gene Ontology
 GO:0016586; C:RSC complex; IDA:UniProtKB.
 GO:0043044; P:ATP-dependent chromatin remodeling; IDA:UniProtKB.
 GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.
 GO:0006337; P:nucleosome disassembly; IDA:SGD.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD. 
Interpro
 IPR001487; Bromodomain. 
Pfam
 PF00439; Bromodomain 
SMART
  
PROSITE
  
PRINTS