CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010408
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribonuclease P protein subunit p38 
Protein Synonyms/Alias
 RNaseP protein p38 
Gene Name
 RPP38 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
53QTLEDRLKAIGLQKIubiquitination[1]
59LKAIGLQKIEDKKKKubiquitination[2]
111WTPAHVRKQLAIGVNubiquitination[1]
241TSFEDLSKPKRKLADacetylation[3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
 Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. RPP38 may associate transiently with RNase P RNA as a factor involved in the transport of H1 RNA to the putative site of its assembly in the cell, the nucleolus. 
Sequence Annotation
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 226 226 Phosphoserine.
 MOD_RES 235 235 Phosphoserine.  
Keyword
 Acetylation; Complete proteome; Direct protein sequencing; Hydrolase; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; tRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 283 AA 
Protein Sequence
MAAAPQAPGR GSLRKTRPLV VKTSLNNPYI IRWSALESED MHFILQTLED RLKAIGLQKI 60
EDKKKKNKTP FLKKESREKC SIAVDISENL KEKKTDAKQQ VSGWTPAHVR KQLAIGVNEV 120
TRALERRELL LVLVCKSVKP AMITSHLIQL SLSRSVPACQ VPRLSERIAP VIGLKCVLAL 180
AFKKNTTDFV DEVRAIIPRV PSLSVPWLQD RIEDSGENLE TEPLESQDRE LLDTSFEDLS 240
KPKRKLADGR QASVTLQPLK IKKLIPNPNK IRKPPKSKKA TPK 283 
Gene Ontology
 GO:0005655; C:nucleolar ribonuclease P complex; TAS:ProtInc.
 GO:0004526; F:ribonuclease P activity; TAS:ProtInc.
 GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. 
Interpro
 IPR004038; Ribosomal_L7Ae/L30e/S12e/Gad45. 
Pfam
 PF01248; Ribosomal_L7Ae 
SMART
  
PROSITE
  
PRINTS