CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-014260
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 CCR4-NOT transcription complex subunit 7 
Protein Synonyms/Alias
 CCR4-associated factor 1; CAF-1 
Gene Name
 Cnot7 
Gene Synonyms/Alias
 Caf1 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
206MKSCKNLKGGLQEVAubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Has 3'-5' poly(A) exoribonuclease activity for synthetic poly(A) RNA substrate. Its function seems to be partially redundant with that of CNOT8. Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. During miRNA-mediated repression the complex seems also to act as translational repressor during translational initiation. Additional complex functions may be a consequence of its influence on mRNA expression. Required for miRNA-mediated mRNA deadenylation. Associates with members of the BTG family such as TOB1 and BTG2 and is required for their anti-proliferative activity. 
Sequence Annotation
 METAL 40 40 Divalent metal cation 1; catalytic (By
 METAL 40 40 Divalent metal cation 2; catalytic (By
 METAL 42 42 Divalent metal cation 2; catalytic (By
 METAL 161 161 Divalent metal cation 1; catalytic (By
 METAL 230 230 Divalent metal cation 2; catalytic (By
 METAL 278 278 Divalent metal cation 1; catalytic (By  
Keyword
 Complete proteome; Cytoplasm; Exonuclease; Hydrolase; Magnesium; Metal-binding; Nuclease; Nucleus; Reference proteome; Repressor; RNA-binding; RNA-mediated gene silencing; Transcription; Transcription regulation; Translation regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 285 AA 
Protein Sequence
MPAATVDHSQ RICEVWACNL DEEMKKIRQV IRKYNYVAMD TEFPGVVARP IGEFRSNADY 60
QYQLLRCNVD LLKIIQLGLT FMNEQGEYPP GTSTWQFNFK FNLTEDMYAQ DSIELLTTSG 120
IQFKKHEEEG IETQYFAELL MTSGVVLCEG VKWLSFHSGY DFGYLIKILT NSNLPEEELD 180
FFEILRLFFP VIYDVKYLMK SCKNLKGGLQ EVAEQLELER IGPQHQAGSD SLLTGMAFFK 240
MREMFFEDHI DDAKYCGHLY GLGSGSSYVQ NGTGNAYEEE ASKQS 285 
Gene Ontology
 GO:0030014; C:CCR4-NOT complex; IPI:MGI.
 GO:0000932; C:cytoplasmic mRNA processing body; IDA:UniProtKB.
 GO:0005634; C:nucleus; IDA:MGI.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0004535; F:poly(A)-specific ribonuclease activity; IMP:MGI.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0033962; P:cytoplasmic mRNA processing body assembly; IGI:MGI.
 GO:0000290; P:deadenylation-dependent decapping of nuclear-transcribed mRNA; IMP:MGI.
 GO:0043928; P:exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay; ISS:UniProtKB.
 GO:0031047; P:gene silencing by RNA; IMP:UniProtKB.
 GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB.
 GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IMP:MGI.
 GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.
 GO:1900153; P:positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IMP:UniProtKB.
 GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; IMP:UniProtKB.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.
 GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR006941; RNase_CAF1.
 IPR012337; RNaseH-like_dom. 
Pfam
 PF04857; CAF1 
SMART
  
PROSITE
  
PRINTS