CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003838
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 S-formylglutathione hydrolase 
Protein Synonyms/Alias
 FGH; Esterase D; Methylumbelliferyl-acetate deacetylase 
Gene Name
 ESD 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
4****MALKQISSNKCacetylation[1]
4****MALKQISSNKCubiquitination[1, 2, 3]
10LKQISSNKCFGGLQKacetylation[1]
10LKQISSNKCFGGLQKubiquitination[1, 2, 3]
17KCFGGLQKVFEHDSVubiquitination[1, 2, 3]
29DSVELNCKMKFAVYLubiquitination[1, 3]
31VELNCKMKFAVYLPPubiquitination[4, 5]
39FAVYLPPKAETGKCPacetylation[6]
167LKNPGKYKSVSAFAPubiquitination[3, 4, 5, 7]
185PVLCPWGKKAFSGYLubiquitination[2, 3]
186VLCPWGKKAFSGYLGubiquitination[3]
198YLGTDQSKWKAYDATubiquitination[3, 4, 5, 7]
200GTDQSKWKAYDATHLacetylation[6]
200GTDQSKWKAYDATHLubiquitination[2, 3, 4, 5]
209YDATHLVKSYPGSQLubiquitination[4, 5]
247IAACTEKKIPVVFRLubiquitination[3]
278DHIRHHAKYLNA***acetylation[6]
Reference
 [1] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [2] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [5] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [6] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [7] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Serine hydrolase involved in the detoxification of formaldehyde. 
Sequence Annotation
 ACT_SITE 149 149 Charge relay system.
 ACT_SITE 226 226 Charge relay system.
 ACT_SITE 260 260 Charge relay system.
 MOD_RES 200 200 N6-acetyllysine.  
Keyword
 3D-structure; Acetylation; Complete proteome; Cytoplasm; Cytoplasmic vesicle; Direct protein sequencing; Hydrolase; Polymorphism; Reference proteome; Serine esterase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 282 AA 
Protein Sequence
MALKQISSNK CFGGLQKVFE HDSVELNCKM KFAVYLPPKA ETGKCPALYW LSGLTCTEQN 60
FISKSGYHQS ASEHGLVVIA PDTSPRGCNI KGEDESWDFG TGAGFYVDAT EDPWKTNYRM 120
YSYVTEELPQ LINANFPVDP QRMSIFGHSM GGHGALICAL KNPGKYKSVS AFAPICNPVL 180
CPWGKKAFSG YLGTDQSKWK AYDATHLVKS YPGSQLDILI DQGKDDQFLL DGQLLPDNFI 240
AACTEKKIPV VFRLQEGYDH SYYFIATFIT DHIRHHAKYL NA 282 
Gene Ontology
 GO:0016023; C:cytoplasmic membrane-bounded vesicle; NAS:UniProtKB.
 GO:0005794; C:Golgi apparatus; IDA:HPA.
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0004091; F:carboxylesterase activity; NAS:UniProtKB.
 GO:0047374; F:methylumbelliferyl-acetate deacetylase activity; IEA:EC.
 GO:0018738; F:S-formylglutathione hydrolase activity; IEA:EC.
 GO:0046294; P:formaldehyde catabolic process; IEA:InterPro. 
Interpro
 IPR000801; Esterase_put.
 IPR014186; S-formylglutathione_hydrol. 
Pfam
 PF00756; Esterase 
SMART
  
PROSITE
  
PRINTS