CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-033411
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 PERQ amino acid-rich with GYF domain-containing protein 2 
Protein Synonyms/Alias
  
Gene Name
 GIGYF2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
458DDERLASKLQEHRAKubiquitination[1, 2]
528QPLGDIMKMWGRVPFubiquitination[1]
610LQQFQTLKMRISDQNubiquitination[1, 3, 4]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [4] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 720 AA 
Protein Sequence
MAAETQTLNF GPEWLRALSS GGSITSPPLS PALPKYKLAD YRYGREEMLA LFLKDNKIPS 60
DLLDKEFLPI LQEEPLPPLA LVPFTEEEQR NFSMSVNSAA VLRLTGRGGG GTVVGAPRGR 120
SSSRGRGRPN FEEGGPTSVG RKHEFIRSES ENWRIFREEQ NGEDEDGGWR LAGSRRDGER 180
WRPHSPGWRE HMERRRRFEF DFRDRDDERG YRRVRSGSGS IDDDRDSLPE WCLEDAEEEM 240
GTFDSSGAFL SLKKVQKEPI PEEQEMDFRP VDEGEECSDS EGSHNEEAKE PDKTNKKEGE 300
KTDRVGVEAS EETPQTSSSS ARPGTPSDHQ SQEASQFERK DEPKTEQTEK AEEETRMENS 360
LPAKVPSRGD EMVADVQQPL SQIPSDTASP LLILPPPVPN PSPTLRPVET PVVGAPGMGS 420
VSTEPDDEEG LKHLEQQAEK MVAYLQDSAL DDERLASKLQ EHRAKGVSIP LMHEAMQKWY 480
YKDPQGEIQG PFNNQEMAEW FQAGYFTMSL LVKRACDESF QPLGDIMKMW GRVPFSPGPA 540
PPPHMGELDQ ERLTRQQELT ALYQMQHLQY QQFLIQQQYA QVLAQQQKAA LSSQQQQQLA 600
LLLQQFQTLK MRISDQNIIP SVTRSVSVPD TGSIWELQPT ASQPTVWEGG SVWDLPLDTT 660
TPGPALEQLQ QLEKAKAAKL EQERREAEMR AKREEEERKR QEELRRQQEE ILRRQQEEER 720 
Gene Ontology
  
Interpro
 IPR003169; GYF. 
Pfam
 PF02213; GYF 
SMART
 SM00444; GYF 
PROSITE
 PS50829; GYF 
PRINTS