CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003618
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Putative reactive intermediate deaminase TdcF 
Protein Synonyms/Alias
  
Gene Name
 tdcF 
Gene Synonyms/Alias
 yhaR; b3113; JW5521 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
115VQVARLPKDVKLEIEacetylation[1]
118ARLPKDVKLEIEAIAacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 May be a post-translational regulator that controls the metabolic fate of L-threonine or the potentially toxic intermediate 2-ketobutyrate. 
Sequence Annotation
 REGION 105 107 Substrate binding.
 BINDING 120 120 Substrate.
 MOD_RES 58 58 N6-(pyridoxal phosphate)lysine (By  
Keyword
 3D-structure; Complete proteome; Hydrolase; Pyridoxal phosphate; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 129 AA 
Protein Sequence
MKKIIETQRA PGAIGPYVQG VDLGSMVFTS GQIPVCPQTG EIPADVQDQA RLSLENVKAI 60
VVAAGLSVGD IIKMTVFITD LNDFATINEV YKQFFDEHQA TYPTRSCVQV ARLPKDVKLE 120
IEAIAVRSA 129 
Gene Ontology
 GO:0019239; F:deaminase activity; IEA:InterPro.
 GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
 GO:0042802; F:identical protein binding; IDA:EcoCyc.
 GO:0070689; P:L-threonine catabolic process to propionate; IEA:UniProtKB-UniPathway.
 GO:0006566; P:threonine metabolic process; IDA:UniProtKB. 
Interpro
 IPR013813; Endoribo_LPSP/chorism_mut-like.
 IPR006056; YjgF-like.
 IPR019897; YjgF-like_CS.
 IPR006175; YjgF/Yer057p/UK114. 
Pfam
 PF01042; Ribonuc_L-PSP 
SMART
  
PROSITE
 PS01094; UPF0076 
PRINTS