CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002975
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 N utilization substance protein B 
Protein Synonyms/Alias
 Protein NusB 
Gene Name
 nusB 
Gene Synonyms/Alias
 ssyB; b0416; JW0406 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
67AYLDGLMKPYLSRLLacetylation[1]
82EELGQVEKAVLRIALacetylation[1]
94IALYELSKRSDVPYKacetylation[1]
101KRSDVPYKVAINEAIacetylation[1]
112NEAIELAKSFGAEDSacetylation[1]
121FGAEDSHKFVNGVLDacetylation[1]
129FVNGVLDKAAPVIRPacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 One of the proteins essential for the formation of the RNA polymerase antitermination complex in the presence of lambda phage N protein. However, it is involved in the transcription termination process at certain sites during normal bacterial growth. Binds to the BoxA RNA motif. 
Sequence Annotation
  
Keyword
 3D-structure; Complete proteome; Reference proteome; RNA-binding; Transcription; Transcription regulation; Transcription termination. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 139 AA 
Protein Sequence
MKPAARRRAR ECAVQALYSW QLSQNDIADV EYQFLAEQDV KDVDVLYFRE LLAGVATNTA 60
YLDGLMKPYL SRLLEELGQV EKAVLRIALY ELSKRSDVPY KVAINEAIEL AKSFGAEDSH 120
KFVNGVLDKA APVIRPNKK 139 
Gene Ontology
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0006353; P:DNA-dependent transcription, termination; IEA:HAMAP.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR011605; NusB_fam.
 IPR006027; NusB_RsmB_TIM44. 
Pfam
 PF01029; NusB 
SMART
  
PROSITE
  
PRINTS