CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037451
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 TBC1 domain family member 23 
Protein Synonyms/Alias
  
Gene Name
 TBC1D23 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
358NKMTVALKTKSVNVRubiquitination[1, 2]
367KSVNVREKVISFIENubiquitination[2]
511VVKITSKKKHPELITubiquitination[3]
Reference
 [1] A data set of human endogenous protein ubiquitination sites.
 Shi Y, Chan DW, Jung SY, Malovannaya A, Wang Y, Qin J.
 Mol Cell Proteomics. 2011 May;10(5):M110.002089. [PMID: 20972266]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level.
 Danielsen JM, Sylvestersen KB, Bekker-Jensen S, Szklarczyk D, Poulsen JW, Horn H, Jensen LJ, Mailand N, Nielsen ML.
 Mol Cell Proteomics. 2011 Mar;10(3):M110.003590. [PMID: 21139048
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 562 AA 
Protein Sequence
MGWYFRLART EHYSQRLPAV YWDCSQKGRP FHLFRLLIQY HEPELCSYLD TKKITPDSYA 60
LNWLGSLFAC YCSTEVTQAI WDGYLQQADP FFIYFLMLII LVNAKEVILT QESDSKEEVI 120
KFLENTPSSL NIEDIEDLFS LAQYYCSKTP ASFRKDNHHL FGSTLLGIKD DDADLSQALC 180
LAISVSEILQ ANQLQGEGVR FFVVDCRPAE QYNAGHLSTA FHLDSDLMLQ NPSEFAQSVK 240
SLLEAQKQSI ESGSIAGGEH LCFMGSGREE EDMYMNMVLA HFLQKNKEYV SIASGGFMAL 300
QQHLADINVD GPENGYGHWI ASTSGSRSSI NSVDGESPNG SSDRGMKSLV NKMTVALKTK 360
SVNVREKVIS FIENTSTPVD RMSFNLPWPD RSCTERHVSS SDRVGKPYRG VKPVFSIGDE 420
EEYDTDEIDS SSMSDDDRKE VVNIQTWINK PDVKHHFPCK EVKESGHMFP SHLLVTATHM 480
YCLREIVSRK GLAYIQSRQA LNSVVKITSK KKHPELITFK YGNSSASGIE ILAIERYLIP 540
NAGDATKAIK QQIMKVLDAL ES 562 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
 GO:0032851; P:positive regulation of Rab GTPase activity; IEA:GOC. 
Interpro
 IPR000195; Rab-GTPase-TBC_dom.
 IPR001763; Rhodanese-like_dom. 
Pfam
 PF00566; RabGAP-TBC
 PF00581; Rhodanese 
SMART
  
PROSITE
 PS50206; RHODANESE_3
 PS50086; TBC_RABGAP 
PRINTS