CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031631
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Poly(A) binding protein, cytoplasmic 3 
Protein Synonyms/Alias
 Protein Pabpc6; Similar to RIKEN cDNA 4932702K14 (Predicted) 
Gene Name
 Pabpc6 
Gene Synonyms/Alias
 Pabpc3; RGD1311201_predicted; rCG_44913 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
78TMNFDVIKGKPVRIMacetylation[1]
188AELGARAKEFTNVYIacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 643 AA 
Protein Sequence
MNPSDPSYSL ASLYVGDLHP DVTEAMLYEK FSPAGPILSI RVYRDRTTRR SLGYASVNFQ 60
QLEDAERALD TMNFDVIKGK PVRIMWSQRD PSLRKSGVGN IFVKNLDRSI DSKTLYDTFS 120
AFGNILSCKV VCDENGSKGY GFVHFETQEE AERAIEKMNG MFLNDRKVFV GRFKSRRDRQ 180
AELGARAKEF TNVYIKNLGE DMDDERLQDL FSRFGPALSV KVMTDESGKS KGFGFVSFER 240
HEDARKAVDE MNGKDLNGKQ IYVGRAQKKV ERQTELKHKF GQMKQDKPKI EQVPQDRSVR 300
CQGVNLYVKN LDDGIDDERL RKEFSPFGTI TSAKVTMEGG RSKGFGFVCF SSPEEATKAV 360
TEMNGRIVAT KPLYVALAQR KEERQAHLSN QYMQRMASTS AVPNPGINPF QPAQGLSGYF 420
MTATAPTQNR GTYYAPNQTT QQGPSARGSA QGTRAHPFQN MSSAIHPSNT MPSFSTSGPT 480
SSQAVRHRTA STSTQMMGPH PAAASTAAAP AARTVTQYKY TAGVRNPPQH LNTQPQVTTQ 540
RSAVSAQGKE SLTVSMLASA PPQAQKQMLG EWLFSLIQAM HPALAGKITG MLLEIDNLEL 600
RHMLESPECL HTKVDEAIAV LQAHQAKETS QKAVSSVAGV PTS 643 
Gene Ontology
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR006515; PABP_1234.
 IPR002004; PABP_HYD.
 IPR000504; RRM_dom. 
Pfam
 PF00658; PABP
 PF00076; RRM_1 
SMART
 SM00517; PolyA
 SM00360; RRM 
PROSITE
 PS51309; PABC
 PS50102; RRM 
PRINTS