CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-028330
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 50S ribosomal protein L25 
Protein Synonyms/Alias
 General stress protein CTC 
Gene Name
 rplY 
Gene Synonyms/Alias
 ctc; MSMEG_5431; MSMEI_5282 
Created Date
 July 27, 2013 
Organism
 Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) 
NCBI Taxa ID
 246196 
Lysine Modification
Position
Peptide
Type
References
21NVRTRTGKGASRQARpupylation[1]
Reference
 [1] Proteome-wide identification of mycobacterial pupylation targets.
 Poulsen C, Akhter Y, Jeon AH, Schmitt-Ulms G, Meyer HE, Stefanski A, Stühler K, Wilmanns M, Song YH.
 Mol Syst Biol. 2010 Jul 13;6:386. [PMID: 20631680] 
Functional Description
 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance (By similarity). 
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 215 AA 
Protein Sequence
MAKTANIPNK LTANVRTRTG KGASRQARRD GKVPAVLYGH GTDPQHLELN ARDFAAVLRS 60
HGTNAILTLD IEGTEQLALT KALDVHPIRR NIQHADLLVV QRGEKVTVEV TVLVEGDATP 120
GTLVTQDANT IEIEAEALSI PEQLTVSVEG VEAGTQITAG QISLPEGVNL ISDPELLVVN 180
VVEAPSAEAL EEEGAGETGA AEAPAEEAPA EEPAE 215 
Gene Ontology
 GO:0005840; C:ribosome; IEA:UniProtKB-KW.
 GO:0008097; F:5S rRNA binding; IEA:InterPro.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:HAMAP. 
Interpro
 IPR020056; Rbsml_L25/Gln-tRNA_synth_b-brl.
 IPR011035; Ribosomal_L25/Gln-tRNA_synth.
 IPR020057; Ribosomal_L25_b-dom.
 IPR001021; Ribosomal_L25_long.
 IPR020055; Ribosomal_L25_short. 
Pfam
 PF01386; Ribosomal_L25p 
SMART
  
PROSITE
  
PRINTS