CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-017761
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial 
Protein Synonyms/Alias
 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H 
Gene Name
 Hibch 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
54VITLNRPKFLNALSLacetylation[1]
91IIKGAGGKAFCAGGDacetylation[1]
100FCAGGDIKALSEAKKacetylation[1]
220THFVDSEKLRVLEEEacetylation[1]
249VLESYHAKSKMDQDKacetylation[1]
251ESYHAKSKMDQDKSIacetylation[1]
296PFAIEQMKVINKMSPacetylation[1, 2, 3, 4, 5]
296PFAIEQMKVINKMSPsuccinylation[4]
300EQMKVINKMSPTSLKacetylation[3, 4]
300EQMKVINKMSPTSLKsuccinylation[4]
352VRAVLIDKDQTPKWKacetylation[1, 2, 3, 4, 5, 6, 7, 8, 9, 10]
352VRAVLIDKDQTPKWKsuccinylation[4]
357IDKDQTPKWKPANLKacetylation[1, 4, 5]
357IDKDQTPKWKPANLKsuccinylation[4]
359KDQTPKWKPANLKDVacetylation[3, 5]
364KWKPANLKDVTDEDLacetylation[3, 4, 5]
364KWKPANLKDVTDEDLsuccinylation[4]
376EDLNSYFKSLGSSDLacetylation[4, 5]
376EDLNSYFKSLGSSDLsuccinylation[4]
384SLGSSDLKF******acetylation[3]
Reference
 [1] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [2] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [3] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [4] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [5] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [6] The fasted/fed mouse metabolic acetylome: N6-acetylation differences suggest acetylation coordinates organ-specific fuel switching.
 Yang L, Vaitheesvaran B, Hartil K, Robinson AJ, Hoopmann MR, Eng JK, Kurland IJ, Bruce JE.
 J Proteome Res. 2011 Sep 2;10(9):4134-49. [PMID: 21728379]
 [7] Mitochondrial acetylome analysis in a mouse model of alcohol-induced liver injury utilizing SIRT3 knockout mice.
 Fritz KS, Galligan JJ, Hirschey MD, Verdin E, Petersen DR.
 J Proteome Res. 2012 Mar 2;11(3):1633-43. [PMID: 22309199]
 [8] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [9] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [10] Circadian acetylome reveals regulation of mitochondrial metabolic pathways.
 Masri S, Patel VR, Eckel-Mahan KL, Peleg S, Forne I, Ladurner AG, Baldi P, Imhof A, Sassone-Corsi P.
 Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3339-44. [PMID: 23341599
Functional Description
 Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA (By similarity). 
Sequence Annotation
 BINDING 120 120 Substrate (By similarity).
 BINDING 145 145 Substrate; via amide nitrogen (By
 BINDING 168 168 Substrate (By similarity).
 BINDING 176 176 Substrate (By similarity).
 MOD_RES 91 91 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Branched-chain amino acid catabolism; Complete proteome; Direct protein sequencing; Hydrolase; Mitochondrion; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 385 AA 
Protein Sequence
MGQPYAWRLL SRVSSFRRAS VILQHLRMSM HTEAAEVLLE RRGCGGVITL NRPKFLNALS 60
LNMIRQIYPQ LKTWEQDPDT FLIIIKGAGG KAFCAGGDIK ALSEAKKARQ NLTQDLFREE 120
YILNNAIASC QKPYVALIDG ITMGGGVGLS VHGQFRVATE RSLFAMPETG IGLFPDVGGG 180
YFLPRLQGKL GYFLALTGYR LKGRDVHRAG IATHFVDSEK LRVLEEELLA LKSPSAEDVA 240
GVLESYHAKS KMDQDKSIIF EEHMDKINSC FSANTVEQII ENLRQDGSPF AIEQMKVINK 300
MSPTSLKITL RQLMEGSSKT LQEVLIMEYR ITQACMEGHD FHEGVRAVLI DKDQTPKWKP 360
ANLKDVTDED LNSYFKSLGS SDLKF 385 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0003860; F:3-hydroxyisobutyryl-CoA hydrolase activity; IEA:EC.
 GO:0006574; P:valine catabolic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR014748; Crontonase_C. 
Pfam
  
SMART
  
PROSITE
 PS00166; ENOYL_COA_HYDRATASE 
PRINTS