CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021974
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 mRNA-decapping enzyme 1A 
Protein Synonyms/Alias
 Smad4-interacting transcriptional co-activator; Transcription factor SMIF 
Gene Name
 DCP1A 
Gene Synonyms/Alias
 SMIF 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
47PKANQWEKTDIEGTLubiquitination[1, 2]
120NDCHRIAKLMADVVEubiquitination[2]
140SQQAARDKQSPSQANubiquitination[2]
397PSVDLLQKLRLTPQHubiquitination[2, 3]
537GTPESQRKPSIILSKubiquitination[2]
Reference
 [1] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.
 Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.
 J Proteome Res. 2012 Feb 3;11(2):796-807. [PMID: 22053931]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
 Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7- methyl guanine cap structure from mRNA molecules, yielding a 5'- phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1. 
Sequence Annotation
 MOD_RES 142 142 Phosphoserine.
 MOD_RES 180 180 Phosphoserine.
 MOD_RES 315 315 Phosphoserine.
 MOD_RES 319 319 Phosphoserine.
 MOD_RES 334 334 Phosphoserine.
 MOD_RES 353 353 Phosphoserine.
 MOD_RES 401 401 Phosphothreonine.
 MOD_RES 422 422 Phosphoserine.
 MOD_RES 522 522 Phosphoserine.
 MOD_RES 523 523 Phosphoserine.
 MOD_RES 525 525 Phosphoserine.
 MOD_RES 531 531 Phosphothreonine.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Hydrolase; Nonsense-mediated mRNA decay; Nucleus; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 582 AA 
Protein Sequence
MEALSRAGQE MSLAALKQHD PYITSIADLT GQVALYTFCP KANQWEKTDI EGTLFVYRRS 60
ASPYHGFTIV NRLNMHNLVE PVNKDLEFQL HEPFLLYRNA SLSIYSIWFY DKNDCHRIAK 120
LMADVVEEET RRSQQAARDK QSPSQANGCS DHRPIDILEM LSRAKDEYER NQMGDSNISS 180
PGLQPSTQLS NLGSTETLEE MPSGSQDKSA PSGHKHLTVE ELFGTSLPKE QPAVVGLDSE 240
EMERLPGDAS QKEPNSFLPF PFEQLGGAPQ SETLGVPSAA HHSVQPEITT PVLITPASIT 300
QSNEKHAPTY TIPLSPVLSP TLPAEAPTAQ VPPSLPRNST MMQAVKTTPR QRSPLLNQPV 360
PELSHASLIA NQSPFRAPLN VTNTAGTSLP SVDLLQKLRL TPQHDQIQTQ PLGKGAMVAS 420
FSPAAGQLAT PESFIEPPSK TAAARVAASA SLSNMVLAPL QSMQQNQDPE VFVQPKVLSS 480
AIQVAGAPLV TATTTAVSSV LLAPSVFQQT VTRSSDLERK ASSPSPLTIG TPESQRKPSI 540
ILSKSQLQDT LIHLIKNDSS FLSTLHEVYL QVLTKNKDNH NL 582 
Gene Ontology
 GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
 GO:0043928; P:exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay; TAS:Reactome.
 GO:0010467; P:gene expression; TAS:Reactome.
 GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW. 
Interpro
 IPR010334; DCP1.
 IPR011993; PH_like_dom. 
Pfam
 PF06058; DCP1 
SMART
  
PROSITE
  
PRINTS