CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006835
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Uncharacterized glycosyl hydrolase YBR056W 
Protein Synonyms/Alias
  
Gene Name
 YBR056W; YBR0510 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
500RGLDEFNKY******ubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
  
Sequence Annotation
 ACT_SITE 236 236 Proton donor (By similarity).
 ACT_SITE 333 333 Nucleophile (By similarity).  
Keyword
 Complete proteome; Glycosidase; Hydrolase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 501 AA 
Protein Sequence
MIGSLRNKFE HFKVSEKGGQ NLSTTLPKLP PAKDLDRSTI YKYRYNYGVN LGALFVLEPW 60
IFSKETICTI DGKEYDSEFD AISQQLKKHS SEDVAKMLSD HYKKYIDRID WEWLSKDAHI 120
TALRIPIGYW HVEDGKHLDS LPFAPLRKVY ELAKPWEKLG ELINNAKKMS IGVLIDLHGL 180
PGGANCDSHS GSKSGEAAFF HKEKYMTKVY KDILPAIINT MTLGNENIIG IQVVNEACFD 240
NNPKGQKFYY SEAINTVEKL QPGLPVIISD GWWPQQWADW VKEKHFSEIV VIDSHVYRCF 300
SDSDKSKDAN SIIKDLPNTV NFPHEDADYT VGEFSGVLDG QTWNKTSGDR DAIVQKYVQT 360
QADVFSHVAS WGWFFWTLQF EYGDGGEWGL APMMQKGNLP KRPHGDDLQV DKKKIDSIIH 420
EHEAYWNGKG KNFEHWRFED GIKTAVDDII AFRKFDNSLI GRWHSWKSQR RAEYVSAKKD 480
SEFMWEWDQG YQRGLDEFNK Y 501 
Gene Ontology
 GO:0005758; C:mitochondrial intermembrane space; IDA:SGD.
 GO:0016798; F:hydrolase activity, acting on glycosyl bonds; IEA:UniProtKB-KW.
 GO:0005975; P:carbohydrate metabolic process; IEA:InterPro. 
Interpro
 IPR013781; Glyco_hydro_catalytic_dom.
 IPR017853; Glycoside_hydrolase_SF. 
Pfam
  
SMART
  
PROSITE
 PS00659; GLYCOSYL_HYDROL_F5 
PRINTS