CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016414
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Survival of motor neuron-related-splicing factor 30 
Protein Synonyms/Alias
 30 kDa splicing factor SMNrp; SMN-related protein; Survival motor neuron domain-containing protein 1 
Gene Name
 Smndc1 
Gene Synonyms/Alias
 Smnr; Spf30 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
219GTCGIADKPMTQYQDacetylation[1, 2]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
 Necessary for spliceosome assembly. Overexpression causes apoptosis (By similarity). 
Sequence Annotation
 DOMAIN 72 132 Tudor.
 MOTIF 142 160 Nuclear localization signal (Potential).
 MOD_RES 201 201 Phosphoserine (By similarity).
 MOD_RES 219 219 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Apoptosis; Complete proteome; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Spliceosome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 238 AA 
Protein Sequence
MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLAS 60
SDSFASTQPT HSWKVGDKCM AVWSEDGQCY EAEIEEIDEE NGTAAITFAV YGNAEVTPLL 120
NLKPVEEGRK AKEDSGNKPM SKKEMIAQQR EYKKKKALKK AQRIKELEQE REDQKVKWQQ 180
FNNRAYSKNK KGQVKRSIFA SPESVTGKVG VGTCGIADKP MTQYQDTSKY NVRHLMPQ 238 
Gene Ontology
 GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.
 GO:0005737; C:cytoplasm; IEA:InterPro.
 GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
 GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
 GO:0003723; F:RNA binding; IEA:InterPro.
 GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. 
Interpro
 IPR010304; Survival_motor_neuron.
 IPR002999; Tudor. 
Pfam
 PF06003; SMN 
SMART
 SM00333; TUDOR 
PROSITE
 PS50304; TUDOR 
PRINTS