CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010465
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 30S ribosomal protein S3 
Protein Synonyms/Alias
  
Gene Name
 rpsC 
Gene Synonyms/Alias
 rps3; TTHA1686 
Created Date
 July 27, 2013 
Organism
 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 
NCBI Taxa ID
 300852 
Lysine Modification
Position
Peptide
Type
References
45RIRGLLEKELYSAGLacetylation[1]
Reference
 [1] Acetylome with structural mapping reveals the significance of lysine acetylation in Thermus thermophilus.
 Okanishi H, Kim K, Masui R, Kuramitsu S.
 J Proteome Res. 2013 Aug 1;. [PMID: 23901841] 
Functional Description
 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation. 
Sequence Annotation
 DOMAIN 39 107 KH type-2.  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 239 AA 
Protein Sequence
MGNKIHPIGF RLGITRDWES RWYAGKKQYR HLLLEDQRIR GLLEKELYSA GLARVDIERA 60
ADNVAVTVHV AKPGVVIGRG GERIRVLREE LAKLTGKNVA LNVQEVQNPN LSAPLVAQRV 120
AEQIERRFAV RRAIKQAVQR VMESGAKGAK VIVSGRIGGA EQARTEWAAQ GRVPLHTLRA 180
NIDYGFALAR TTYGVLGVKA YIFLGEVIGG QKPKARPELP KAEERPRRRR PAVRVKKEE 239 
Gene Ontology
 GO:0015935; C:small ribosomal subunit; IEA:InterPro.
 GO:0003729; F:mRNA binding; IEA:HAMAP.
 GO:0019843; F:rRNA binding; IEA:HAMAP.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:HAMAP. 
Interpro
 IPR004087; KH_dom.
 IPR015946; KH_dom-like_a/b.
 IPR004044; KH_dom_type_2.
 IPR009019; KH_prok-type.
 IPR005704; Ribosomal_S3_bac.
 IPR001351; Ribosomal_S3_C.
 IPR018280; Ribosomal_S3_CS. 
Pfam
 PF07650; KH_2
 PF00189; Ribosomal_S3_C 
SMART
 SM00322; KH 
PROSITE
 PS50823; KH_TYPE_2
 PS00548; RIBOSOMAL_S3 
PRINTS