CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008219
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial 
Protein Synonyms/Alias
 Complex I-51kD; CI-51kD; NADH dehydrogenase flavoprotein 1; NADH-ubiquinone oxidoreductase 51 kDa subunit 
Gene Name
 NDUFV1 
Gene Synonyms/Alias
 UQOR1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
71KTKEILLKGPDWILGubiquitination[1, 2]
81DWILGEIKTSGLRGRubiquitination[1]
126EGEPGTCKDREILRHubiquitination[2]
137ILRHDPHKLLEGCLVubiquitination[2]
365DRSTDIVKAIARLIEubiquitination[2]
375ARLIEFYKHESCGQCubiquitination[2]
394EGVDWMNKVMARFVRubiquitination[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). 
Sequence Annotation
 NP_BIND 87 96 NAD(H) (By similarity).
 NP_BIND 199 247 FMN (By similarity).
 METAL 379 379 Iron-sulfur (4Fe-4S) (Potential).
 METAL 382 382 Iron-sulfur (4Fe-4S) (Potential).
 METAL 385 385 Iron-sulfur (4Fe-4S) (Potential).
 METAL 425 425 Iron-sulfur (4Fe-4S) (Potential).
 MOD_RES 81 81 N6-acetyllysine (By similarity).
 MOD_RES 104 104 N6-acetyllysine (By similarity).
 MOD_RES 375 375 N6-acetyllysine (By similarity).  
Keyword
 4Fe-4S; Acetylation; Alternative splicing; Complete proteome; Disease mutation; Electron transport; Flavoprotein; FMN; Iron; Iron-sulfur; Leigh syndrome; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; NAD; Oxidoreductase; Polymorphism; Reference proteome; Respiratory chain; Transit peptide; Transport; Ubiquinone. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 464 AA 
Protein Sequence
MLATRRLLGW SLPARVSVRF SGDTTAPKKT SFGSLKDEDR IFTNLYGRHD WRLKGSLSRG 60
DWYKTKEILL KGPDWILGEI KTSGLRGRGG AGFPTGLKWS FMNKPSDGRP KYLVVNADEG 120
EPGTCKDREI LRHDPHKLLE GCLVGGRAMG ARAAYIYIRG EFYNEASNLQ VAIREAYEAG 180
LIGKNACGSG YDFDVFVVRG AGAYICGEET ALIESIEGKQ GKPRLKPPFP ADVGVFGCPT 240
TVANVETVAV SPTICRRGGT WFAGFGRERN SGTKLFNISG HVNHPCTVEE EMSVPLKELI 300
EKHAGGVTGG WDNLLAVIPG GSSTPLIPKS VCETVLMDFD ALVQAQTGLG TAAVIVMDRS 360
TDIVKAIARL IEFYKHESCG QCTPCREGVD WMNKVMARFV RGDARPAEID SLWEISKQIE 420
GHTICALGDG AAWPVQGLIR HFRPELEERM QRFAQQHQAR QAAS 464 
Gene Ontology
 GO:0005747; C:mitochondrial respiratory chain complex I; IDA:UniProtKB.
 GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
 GO:0010181; F:FMN binding; IEA:InterPro.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0051287; F:NAD binding; IEA:InterPro.
 GO:0008137; F:NADH dehydrogenase (ubiquinone) activity; NAS:UniProtKB.
 GO:0006120; P:mitochondrial electron transport, NADH to ubiquinone; NAS:UniProtKB.
 GO:0044281; P:small molecule metabolic process; TAS:Reactome. 
Interpro
 IPR001949; NADH-UbQ_OxRdtase_51kDa_CS.
 IPR019575; NADH-UbQ_OxRdtase_Fsu_4Fe4S-bd.
 IPR011537; NADH-UbQ_OxRdtase_suF.
 IPR011538; NADH_UbQ_OxRdtase_51kDa_su.
 IPR019554; Soluble_ligand-bd. 
Pfam
 PF01512; Complex1_51K
 PF10589; NADH_4Fe-4S
 PF10531; SLBB 
SMART
 SM00928; NADH_4Fe-4S 
PROSITE
 PS00644; COMPLEX1_51K_1
 PS00645; COMPLEX1_51K_2 
PRINTS