CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006843
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable diguanylate cyclase YegE 
Protein Synonyms/Alias
 DGC 
Gene Name
 yegE 
Gene Synonyms/Alias
 b2067; JW2052 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
502LQSRSPFKLEFRITVacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria. 
Sequence Annotation
 DOMAIN 300 370 PAS 1.
 DOMAIN 374 426 PAC 1.
 DOMAIN 501 552 PAC 2.
 DOMAIN 553 623 PAS 2.
 DOMAIN 626 680 PAC 3.
 DOMAIN 712 845 GGDEF.
 DOMAIN 855 1104 EAL.
 ACT_SITE 763 763 Proton acceptor (Potential).
 METAL 720 720 Magnesium (By similarity).
 METAL 763 763 Magnesium (By similarity).
 BINDING 728 728 Substrate (By similarity).
 BINDING 737 737 Substrate (By similarity).  
Keyword
 Complete proteome; GTP-binding; Magnesium; Metal-binding; Nucleotide-binding; Reference proteome; Repeat; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1105 AA 
Protein Sequence
MSKQSQHVLI ALPHPLLHLV SLGLVSFIFT LFSLELSQFG TQLAPLWFPT SIMMVAFYRH 60
AGRMWPGIAL SCSLGNIAAS ILLFSTSSLN MTWTTINIVE AVVGAVLLRK LLPWYNPLQN 120
LADWLRLALG SAIVPPLLGG VLVVLLTPGD DPLRAFLIWV LSESIGALAL VPLGLLFKPH 180
YLLRHRNPRL LFESLLTLAI TLTLSWLSML YLPWPFTFII VLLMWSAVRL PRMEAFLIFL 240
TTVMMVSLMM AADPSLLATP RTYLMSHMPW LPFLLILLPA NIMTMVMYAF RAERKHISES 300
ETHFRNAMEY SAIGMALVGT EGQWLQTNKA LCQFLGYSQE ELRGLTFQQL TWPEDLNKDL 360
QQVEKLISGE INTYSMEKRY YNRNGDVVWA LLAVSLVRHT DGTPLYFIAQ IEDINELKRT 420
EQVNQQLMER ITLANEAGGI GIWEWELKPN IFSWDKRMFE LYEIPPHIKP NWQVWYECVL 480
PEDRQHAEKV IRDSLQSRSP FKLEFRITVK DGIRHIRALA NRVLNKEGEV ERLLGINMDM 540
TEVKQLNEAL FQEKERLHIT LDSIGEAVVC IDMAMKITFM NPVAEKMSGW TQEEALGVPL 600
LTVLHITFGD NGPLMENIYS ADTSRSAIEQ DVVLHCRSGG SYDVHYSITP LSTLDGSNIG 660
SVLVIQDVTE SRKMLRQLSY SASHDALTHL ANRASFEKQL RILLQTVNST HQRHALVFID 720
LDRFKAVNDS AGHAAGDALL RELASLMLSM LRSSDVLARL GGDEFGLLLP DCNVESARFI 780
ATRIISAVND YHFIWEGRVH RVGASAGITL IDDNNHQAAE VMSQADIACY ASKNGGRGRV 840
TVYEPQQAAA HSERAAMSLD EQWRMIKENQ LMMLAHGVAS PRIPEARNLW LISLKLWSCE 900
GEIIDEQTFR RSFSDPALSH ALDRRVFHEF FQQAAKAVAS KGISISLPLS VAGLSSATLV 960
NDLLEQLENS PLPPRLLHLI IPAEAILDHA ESVQKLRLAG CRIVLSQVGR DLQIFNSLKA 1020
NMADYLLLDG ELCANVQGNL MDEMLITIIQ GHAQRLGMKT IAGPVVLPLV MDTLSGIGVD 1080
LIYGEVIADA QPLDLLVNSS YFAIN 1105 
Gene Ontology
 GO:0052621; F:diguanylate cyclase activity; IGI:EcoCyc.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0000155; F:phosphorelay sensor kinase activity; IEA:InterPro.
 GO:0016849; F:phosphorus-oxygen lyase activity; IEA:InterPro.
 GO:0009190; P:cyclic nucleotide biosynthetic process; IEA:InterPro.
 GO:0035556; P:intracellular signal transduction; IEA:InterPro.
 GO:0023014; P:signal transduction by phosphorylation; IEA:GOC. 
Interpro
 IPR001054; A/G_cyclase.
 IPR001633; Diguanylate_PEstase_EAL_dom.
 IPR000160; GGDEF_dom.
 IPR007895; MASE1.
 IPR001610; PAC.
 IPR000014; PAS.
 IPR000700; PAS-assoc_C.
 IPR013656; PAS_4.
 IPR013655; PAS_fold_3. 
Pfam
 PF00563; EAL
 PF00990; GGDEF
 PF05231; MASE1
 PF08447; PAS_3
 PF08448; PAS_4 
SMART
 SM00052; EAL
 SM00267; GGDEF
 SM00086; PAC
 SM00091; PAS 
PROSITE
 PS50883; EAL
 PS50887; GGDEF
 PS50113; PAC
 PS50112; PAS 
PRINTS