CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037718
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Collectin-12 
Protein Synonyms/Alias
  
Gene Name
 CLP1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
21EEANDDKKPTTKFELubiquitination[1]
65TELTRNKKFTFDAGAubiquitination[1]
138VGPTDVGKSTVCRLLubiquitination[1, 2]
213TNIKLYNKITSRLADubiquitination[1, 3]
278ERLYNELKRDLPHFVubiquitination[1]
292VRTVLLPKSGGVVERubiquitination[1, 3, 4]
331YPHAFNVKFSDVKIYubiquitination[1]
336NVKFSDVKIYKVGAPubiquitination[1, 4]
339FSDVKIYKVGAPTIPubiquitination[1]
362SQEDNQLKLVPVTPGubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [4] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
  
Sequence Annotation
  
Keyword
 ATP-binding; Complete proteome; Nucleotide-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 436 AA 
Protein Sequence
MTDLHSSYTE EMGEEANDDK KPTTKFELER ETELRFEVEA SQSVQLELLT GMAEIFGTEL 60
TRNKKFTFDA GAKVAVFTWH GCSVQLSGRT EVAYVSKDTP MLLYLNTHTA LEQMRRQAEK 120
EEERGPRVMV VGPTDVGKST VCRLLLNYAV RLGRRPTYVE LDVGQGSVSI PGTMGALYIE 180
RPADVEEGFS IQAPLVYHFG STTPGTNIKL YNKITSRLAD VFNQRCEVNR RASVSGCVIN 240
TCGWVKGSGY QALVHAASAF EVDVVVVLDQ ERLYNELKRD LPHFVRTVLL PKSGGVVERS 300
KDFRRECRDE RIREYFYGFR GCFYPHAFNV KFSDVKIYKV GAPTIPDSCL PLGMSQEDNQ 360
LKLVPVTPGR DMVHHLLSVS TAEGTEENLS ETSVAGFIVV TSVDLEHQVF TVLSPAPRPL 420
PKNFLLIMDI RFMDLK 436 
Gene Ontology
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR010655; Pre-mRNA_cleavage_cplxII_Clp1. 
Pfam
 PF06807; Clp1 
SMART
  
PROSITE
  
PRINTS