CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018886
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Peroxisomal membrane protein PEX13 
Protein Synonyms/Alias
 Peroxin-13 
Gene Name
 PEX13 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
304DMLNLALKEQQPKVRubiquitination[1]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Component of the peroxisomal translocation machinery with PEX14 and PEX17. Functions as a docking factor for the predominantly cytoplasmic PTS1 receptor (PAS10/PEX5). Involved in the import of PTS1 and PTS2 proteins. 
Sequence Annotation
 DOMAIN 276 334 SH3.
 REGION 145 233 Targeting to peroxisomes.
 REGION 175 196 Interaction with PEX19.  
Keyword
 Complete proteome; Disease mutation; Membrane; Peroxisome; Peroxisome biogenesis disorder; Protein transport; Reference proteome; SH3 domain; Transmembrane; Transmembrane helix; Transport; Zellweger syndrome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 403 AA 
Protein Sequence
MASQPPPPPK PWETRRIPGA GPGPGPGPTF QSADLGPTLM TRPGQPALTR VPPPILPRPS 60
QQTGSSSVNT FRPAYSSFSS GYGAYGNSFY GGYSPYSYGY NGLGYNRLRV DDLPPSRFVQ 120
QAEESSRGAF QSIESIVHAF ASVSMMMDAT FSAVYNSFRA VLDVANHFSR LKIHFTKVFS 180
AFALVRTIRY LYRRLQRMLG LRRGSENEDL WAESEGTVAC LGAEDRAATS AKSWPIFLFF 240
AVILGGPYLI WKLLSTHSDE VTDSINWASG EDDHVVARAE YDFAAVSEEE ISFRAGDMLN 300
LALKEQQPKV RGWLLASLDG QTTGLIPANY VKILGKRKGR KTVESSKVSK QQQSFTNPTL 360
TKGATVADSL DEQEAAFESV FVETNKVPVA PDSIGKDGEK QDL 403 
Gene Ontology
 GO:0005779; C:integral to peroxisomal membrane; IDA:UniProtKB.
 GO:0021795; P:cerebral cortex cell migration; ISS:UniProtKB.
 GO:0001561; P:fatty acid alpha-oxidation; ISS:UniProtKB.
 GO:0007626; P:locomotory behavior; ISS:UniProtKB.
 GO:0060152; P:microtubule-based peroxisome localization; ISS:UniProtKB.
 GO:0001764; P:neuron migration; ISS:UniProtKB.
 GO:0016560; P:protein import into peroxisome matrix, docking; IMP:UniProtKB.
 GO:0001967; P:suckling behavior; ISS:UniProtKB. 
Interpro
 IPR007223; Peroxin-13_N.
 IPR001452; SH3_domain. 
Pfam
 PF04088; Peroxin-13_N
 PF00018; SH3_1 
SMART
 SM00326; SH3 
PROSITE
 PS50002; SH3 
PRINTS
 PR00452; SH3DOMAIN.