CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-014660
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Spermidine synthase 
Protein Synonyms/Alias
 SPDSY; Putrescine aminopropyltransferase 
Gene Name
 Srm 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
96CSHPNPRKVLIIGGGacetylation[1]
135DVIEVSKKFLPGMAVacetylation[1]
135DVIEVSKKFLPGMAVubiquitination[2]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM). Has a strong preference for putrescine as substrate, and has very low activity towards 1,3-diaminopropane. Has extremely low activity towards spermidine (By similarity). 
Sequence Annotation
 REGION 155 156 S-adenosylmethioninamine binding (By
 REGION 173 176 Putrescine binding (By similarity).
 ACT_SITE 173 173 Proton acceptor (By similarity).
 BINDING 49 49 S-adenosylmethioninamine (By similarity).
 BINDING 79 79 Putrescine (By similarity).
 BINDING 80 80 S-adenosylmethioninamine (By similarity).
 BINDING 104 104 S-adenosylmethioninamine (By similarity).
 BINDING 124 124 S-adenosylmethioninamine (By similarity).
 BINDING 173 173 S-adenosylmethioninamine (By similarity).
 BINDING 241 241 Putrescine (By similarity).
 MOD_RES 1 1 N-acetylmethionine (By similarity).  
Keyword
 Acetylation; Complete proteome; Reference proteome; Spermidine biosynthesis; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 302 AA 
Protein Sequence
MEPGPDGPAA PGPAAIREGW FRETCSLWPG QALSLQVEQL LHHRRSRYQD ILVFRSKTYG 60
NVLVLDGVIQ CTERDEFSYQ EMIANLPLCS HPNPRKVLII GGGDGGVLRE VVKHPSVESV 120
VQCEIDEDVI EVSKKFLPGM AVGFSSSKLT LHVGDGFEFM KQNQDAFDVI ITDSSDPMGP 180
AESLFKESYY QLMKTALKED GILCCQGECQ WLHLDLIKEM RHFCKSLFPV VDYAYCSIPT 240
YPSGQIGFML CSKNPSTNFR EPVQQLTQAQ VEQMQLKYYN SDMHRAAFVL PEFTRKALND 300
IS 302 
Gene Ontology
 GO:0004766; F:spermidine synthase activity; ISS:UniProtKB.
 GO:0008295; P:spermidine biosynthetic process; ISS:UniProtKB. 
Interpro
 IPR001045; Spermidine/spermine_synthase. 
Pfam
 PF01564; Spermine_synth 
SMART
  
PROSITE
 PS01330; SPERMIDINE_SYNTHASE_1
 PS51006; SPERMIDINE_SYNTHASE_2 
PRINTS