CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004306
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ras-related C3 botulinum toxin substrate 2 
Protein Synonyms/Alias
 GX; Small G protein; p21-Rac2 
Gene Name
 RAC2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
5***MQAIKCVVVGDGubiquitination[1]
96SYENVRAKWFPEVRHubiquitination[1, 2]
116PIILVGTKLDLRDDKubiquitination[1]
123KLDLRDDKDTIEKLKubiquitination[1, 3]
133IEKLKEKKLAPITYPubiquitination[1, 2]
147PQGLALAKEIDSVKYacetylation[4]
147PQGLALAKEIDSVKYubiquitination[1, 2]
153AKEIDSVKYLECSALubiquitination[1]
166ALTQRGLKTVFDEAIubiquitination[1, 3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [4] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861
Functional Description
 Plasma membrane-associated small GTPase which cycles between an active GTP-bound and inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses, such as secretory processes, phagocytose of apoptotic cells and epithelial cell polarization. Augments the production of reactive oxygen species (ROS) by NADPH oxidase. 
Sequence Annotation
 NP_BIND 10 17 GTP (By similarity).
 NP_BIND 57 61 GTP (By similarity).
 NP_BIND 115 118 GTP (By similarity).
 MOTIF 32 40 Effector region (Potential).
 MOD_RES 39 39 ADP-ribosylasparagine; by botulinum toxin
 MOD_RES 147 147 N6-acetyllysine.
 MOD_RES 189 189 Cysteine methyl ester (Probable).
 LIPID 189 189 S-geranylgeranyl cysteine.  
Keyword
 3D-structure; Acetylation; ADP-ribosylation; Complete proteome; Cytoplasm; Direct protein sequencing; Disease mutation; GTP-binding; Lipoprotein; Methylation; Nucleotide-binding; Polymorphism; Prenylation; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 192 AA 
Protein Sequence
MQAIKCVVVG DGAVGKTCLL ISYTTNAFPG EYIPTVFDNY SANVMVDSKP VNLGLWDTAG 60
QEDYDRLRPL SYPQTDVFLI CFSLVSPASY ENVRAKWFPE VRHHCPSTPI ILVGTKLDLR 120
DDKDTIEKLK EKKLAPITYP QGLALAKEID SVKYLECSAL TQRGLKTVFD EAIRAVLCPQ 180
PTRQQKRACS LL 192 
Gene Ontology
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0005635; C:nuclear envelope; IEA:Compara.
 GO:0005886; C:plasma membrane; TAS:Reactome.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0003924; F:GTPase activity; TAS:ProtInc.
 GO:0030036; P:actin cytoskeleton organization; IEA:Compara.
 GO:0007411; P:axon guidance; TAS:Reactome.
 GO:0045453; P:bone resorption; IEA:Compara.
 GO:0030031; P:cell projection assembly; IEA:Compara.
 GO:0030168; P:platelet activation; TAS:Reactome.
 GO:0008284; P:positive regulation of cell proliferation; IEA:Compara.
 GO:0010310; P:regulation of hydrogen peroxide metabolic process; TAS:BHF-UCL.
 GO:0060263; P:regulation of respiratory burst; IDA:BHF-UCL.
 GO:0051056; P:regulation of small GTPase mediated signal transduction; TAS:Reactome.
 GO:0007264; P:small GTPase mediated signal transduction; TAS:Reactome. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase.
 IPR003578; Small_GTPase_Rho. 
Pfam
 PF00071; Ras 
SMART
 SM00174; RHO 
PROSITE
 PS51420; RHO 
PRINTS
 PR00449; RASTRNSFRMNG.