CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008979
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cadherin-5 
Protein Synonyms/Alias
 Vascular endothelial cadherin; VE-cadherin; CD144 
Gene Name
 Cdh5 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
690AVYTQVQKPPRLAPGubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. This cadherin may play a important role in endothelial cell biology through control of the cohesion and organization of the intercellular junctions. Acts in concert with KRIT1 to establish and maintain correct endothelial cell polarity and vascular lumen. These effects are mediated by recruitment and activation of the Par polarity complex and RAP1B. Required for activation of PRKCZ and for localization of phosphorylated PRKCZ, PARD3, TIAM1 and RAP1B to the cell junction. 
Sequence Annotation
 DOMAIN 46 149 Cadherin 1.
 DOMAIN 150 256 Cadherin 2.
 DOMAIN 257 371 Cadherin 3.
 DOMAIN 372 476 Cadherin 4.
 DOMAIN 477 593 Cadherin 5.
 CARBOHYD 59 59 N-linked (GlcNAc...) (Potential).
 CARBOHYD 155 155 N-linked (GlcNAc...) (Potential).
 CARBOHYD 441 441 N-linked (GlcNAc...) (Potential).
 CARBOHYD 523 523 N-linked (GlcNAc...) (Potential).
 CARBOHYD 535 535 N-linked (GlcNAc...) (Potential).  
Keyword
 3D-structure; Calcium; Cell adhesion; Cell junction; Cell membrane; Cleavage on pair of basic residues; Complete proteome; Glycoprotein; Membrane; Metal-binding; Phosphoprotein; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 784 AA 
Protein Sequence
MQRLTELATA LGAFLGLLAV AAMAGPNFPQ IDTPNMLPAH HRQKRDWIWN QMHIDEEKNE 60
SLPHYVGKIK SNVNRQNAKY VLQGEFAGKI FGVDANTGNV LAYERLDREK VSEYFLTALI 120
VDKNTNKNLE QPSSFTVKVH DINDNWPVFS HQVFNASVPE MSAIGTSVIR VTAVDADDPT 180
VAGHATVLYQ IVKGNEYFSI DNSGLIFTKI KNLDREKQAE YKIVVETQDA LGLRGESGTA 240
TVMIRLEDIN DNFPVFTQST YTFSVPEDIR VGKPLGFLTV VDPDEPQNRM TKYSIMQGEY 300
RDTFTIETDP KRNEGIIKPT KSLDYEVIQQ YTFYIEATDP TIRYEYLSST SGKNKAMVTI 360
NVLDVDEPPV FQRHFYHFKL PENQKKPLIG TVVAKDPDKA QRSIGYSIRK TSDRGQFFRI 420
TKQGNIYNEK ELDRETYAWY NLTVEANELD SRGNPVGKES IVQVYIEVLD ENDNPPEFAQ 480
PYEPKVCENA AQGKLVVQIS ATDKDVVPVN PKFKFALKNE DSNFTLINNH DNTANITVKY 540
GQFNREHAKF HYLPVLISDN GVPSLTGTST LTVGVCKCNE QGEFTFCEEM AAQAGVSIQA 600
LVAIFLCILT ITVITLLIIL RRRIRKQAHA HSKSALEIHE QLVTYDEEGG GEMDTTSYDV 660
SVLNSVRGGS TKPLRSTMDA RPAVYTQVQK PPRLAPGLHG GPREMATMID VKKEEADNDG 720
GGPPYDTLHI YGYEGAESIA ESLSSLSTNS SDSDIDYDFL NDWGPRFKML AELYGSDPQE 780
ELII 784 
Gene Ontology
 GO:0071944; C:cell periphery; IDA:MGI.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
 GO:0005923; C:tight junction; IDA:MGI.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0001955; P:blood vessel maturation; IMP:MGI.
 GO:0016337; P:cell-cell adhesion; IMP:MGI.
 GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
 GO:0008285; P:negative regulation of cell proliferation; IGI:MGI.
 GO:2000114; P:regulation of establishment of cell polarity; IMP:UniProtKB. 
Interpro
 IPR002126; Cadherin.
 IPR015919; Cadherin-like.
 IPR020894; Cadherin_CS.
 IPR000233; Cadherin_cytoplasmic-dom.
 IPR027397; Catenin_binding_dom. 
Pfam
 PF00028; Cadherin
 PF01049; Cadherin_C 
SMART
 SM00112; CA 
PROSITE
 PS00232; CADHERIN_1
 PS50268; CADHERIN_2 
PRINTS
 PR00205; CADHERIN.