CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039353
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Cdh13 
Protein Synonyms/Alias
  
Gene Name
 Cdh13 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
109PFPRDVGKVVDSDRPacetylation[1]
120SDRPEGSKFRLTGKGacetylation[1]
126SKFRLTGKGVDQDPKacetylation[1]
133KGVDQDPKGTFRINEacetylation[1]
567HPNTDPFKFEIHKQTacetylation[1]
572PFKFEIHKQTVPDKVacetylation[1]
578HKQTVPDKVWKISKIacetylation[1]
581TVPDKVWKISKINNTacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Calcium; Cell adhesion; Complete proteome; Membrane; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 662 AA 
Protein Sequence
VTFSDCKGNK KLHYEVSSPY FKVNSDGTLV AVRNITAVGR TLFVHARTPH AEDMAELVIV 60
GGKDIQGSLQ DIFKFARTSP VPRQKRSIVV SPILIPENQR QPFPRDVGKV VDSDRPEGSK 120
FRLTGKGVDQ DPKGTFRINE NTGSVSVTRT LDRETIATYQ LFVETTDASG RTLEGPVPLE 180
VIVIDQNDNR PIFREGPYIG HVMEGSPTGT TVMRMTAFDA DDPATDNALL RYNIRQQTPD 240
KPSPNMFYID PEKGDIVTVV SPALLDRETL ENPKYELIIE AQDMAGLDVG LTGTATATIV 300
IDDKNDHSPK FTKKEFQATV EEGAVGVIVN LTVEDKDDPA TGAWRAAYTI INGNPGQSFE 360
IHTNPQTNEG MLSVVKPLDY EISAFHTLLI KVENEDPLVP DVSYGPSSTA TVHITVLDVN 420
EGPVFYPDPM MVTKQENISV GSVLLTVNAT DPDSLQHQTI RYSVYKDPAG WLSINPINGT 480
VDTTAVLDRE SPFVHNSVYT ALFLAIDSGN PPATGTGTLM ITLEDVNDNA PVIYPTVAEV 540
CDDARNLSVV ILGASDKDLH PNTDPFKFEI HKQTVPDKVW KISKINNTHA LVSLLQNLNK 600
ANYNLPIMVT DSGKPPMTNI TDLRVQVCSC KNSKVDCNAA GTLHLSLSLL LLFSLLSLLS 660
GL 662 
Gene Ontology
 GO:0048471; C:perinuclear region of cytoplasm; IDA:RGD.
 GO:0005886; C:plasma membrane; IDA:RGD.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0016337; P:cell-cell adhesion; TAS:RGD.
 GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
 GO:0000278; P:mitotic cell cycle; IEP:RGD.
 GO:0001558; P:regulation of cell growth; IMP:RGD.
 GO:0010033; P:response to organic substance; IEP:RGD. 
Interpro
 IPR002126; Cadherin.
 IPR015919; Cadherin-like.
 IPR020894; Cadherin_CS.
 IPR014868; Cadherin_pro_dom. 
Pfam
 PF00028; Cadherin
 PF08758; Cadherin_pro 
SMART
 SM00112; CA 
PROSITE
 PS00232; CADHERIN_1
 PS50268; CADHERIN_2 
PRINTS
 PR00205; CADHERIN.