CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039263
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Limch1 
Protein Synonyms/Alias
  
Gene Name
 Limch1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
62CELLNAIKPGLVKKIacetylation[1]
801QKEQDKLKEEWEKAQacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; LIM domain; Metal-binding; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1085 AA 
Protein Sequence
MACPALGLEV LQPLQPEPPP EPAFAEAQKW IEQVTGRSFG DKDFRTGLEN GILLCELLNA 60
IKPGLVKKIN RLPTPIAGLD NTILFLRGCK ELGLKESQLF DPSDLQDTSN RVTVKNFDYS 120
RKLKNVLVTI YWLGKAANSC TSYSGTTLNL KEFEGLLAQM RKETDDIESP KRSIRDSGYI 180
DCWDSERSDS LSPPRHGRDD SFDSLDSFGS RSRQTPSPDV VLRGSSDGRG SDSESDLPHR 240
KLPDVKKDDM SARRTSHGEP KSAVPFNQYL PNKSNQTAYV PAPLRKKKAE REEYRKSWST 300
ATSPLGGERP FRYGPRTPVS DDAESTSMFD MRCEEEAAVL PHSRARQEQL QLINNQLREE 360
DDKWQDDLAR WKSRRRSASQ DLIKKEEERK KMEKLMSGED GTSERRKSIK TYREIVQEKE 420
RRERELHEAY KNARSQEEAE GILQQYIERF TISEAVLERL EMPKILERSH STEPNVSSFP 480
NDPSPMKYLR QQSLPPPKFT ATVETTIART SVPESSVAAG TGSPSKTSTP NTVPMLTPRP 540
YSQPKNSQEV LKTFKVDGKV SMNGETARGD VEGKEKEDPT AVAPGPSLTK SQMFEGVATV 600
HGSPVQVKQG SNSIEINIKK PNSPPQELTA ASEETESNGR DDENGEESSG ARDVELDSAE 660
PQHFTTTVTR CSPTVALVEF SSSPQLRNEV PEEQDQKKPE NEMSGKVELV LSQKVAKPKS 720
PEPEATLTFP FLDKMPETDQ LHLPNLNSQA DSPSSEKSPA STPFKFWAWD PEEERRRQEK 780
WQQEQERLLQ ERYQKEQDKL KEEWEKAQKE VEEEERRYYE EERKIIEDTV VPFTISSSSA 840
DQLSTSSSVT EGSGTRNKMD LENCQDRDKE RRQNTPLQEN DSDSSLKARE SGLPEEHSSL 900
TQSPSANSEN SVSKGISQDQ QPETEAEASH CGTNPQSAQD PPWNQQISNP PTSKSEDVKP 960
KTLALEKSIN HQIESPGERR KKSPRENFRA GPLSPCSPTP PGQSPNRSIS GKKLCSSCGL 1020
ALGKGAAMII ETLNLYFHIQ CFRCGICKGQ LGDAVSGTDV RIRNGLLNCT DCYMRSRSAG 1080
QPTTL 1085 
Gene Ontology
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0031032; P:actomyosin structure organization; IEA:InterPro. 
Interpro
 IPR001997; Calponin.
 IPR001715; CH-domain.
 IPR001781; Znf_LIM. 
Pfam
 PF00307; CH
 PF00412; LIM 
SMART
 SM00033; CH
 SM00132; LIM 
PROSITE
 PS50021; CH
 PS00478; LIM_DOMAIN_1
 PS50023; LIM_DOMAIN_2 
PRINTS
 PR00889; CALPONIN.