CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-020158
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Alanyl-tRNA editing protein Aarsd1 
Protein Synonyms/Alias
 Alanyl-tRNA synthetase domain-containing protein 1 
Gene Name
 AARSD1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
35TEGSNGKKEVLSGFQubiquitination[1]
126ADHLFKLKTTSWELGubiquitination[1, 2]
161IEQSVNEKIRDRLPVubiquitination[1, 2]
248LSGNRVLKWMERSHGubiquitination[1]
258ERSHGTEKALTALLKubiquitination[1]
265KALTALLKCGAEDHVubiquitination[1]
276EDHVEAVKKLQNSTKubiquitination[1]
277DHVEAVKKLQNSTKIubiquitination[1]
283KKLQNSTKILQKNNLubiquitination[1]
287NSTKILQKNNLNLLRubiquitination[1, 3]
376VAEVLEGKGAGKKGRubiquitination[1, 2]
380LEGKGAGKKGRFQGKubiquitination[1]
381EGKGAGKKGRFQGKAubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
 Functions in trans to edit the amino acid moiety from incorrectly charged tRNA(Ala) (By similarity). 
Sequence Annotation
 METAL 109 109 Zinc (Potential).
 METAL 113 113 Zinc (Potential).
 METAL 209 209 Zinc (Potential).
 METAL 213 213 Zinc (Potential).
 MOD_RES 409 409 Phosphoserine (By similarity).  
Keyword
 Alternative splicing; Complete proteome; Cytoplasm; Metal-binding; Phosphoprotein; Protein biosynthesis; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 412 AA 
Protein Sequence
MAFWCQRDSY AREFTTTVVS CCPAELQTEG SNGKKEVLSG FQVVLEDTVL FPEGGGQPDD 60
RGTINDISVL RVTRRGEQAD HFTQTPLDPG SQVLVRVDWE RRFDHMQQHS GQHLITAVAD 120
HLFKLKTTSW ELGRFRSAIE LDTPSMTAEQ VAAIEQSVNE KIRDRLPVNV RELSLDDPEV 180
EQVSGRGLPD DHAGPIRVVN IEGVDSNMCC GTHVSNLSDL QVIKILGTEK GKKNRTNLIF 240
LSGNRVLKWM ERSHGTEKAL TALLKCGAED HVEAVKKLQN STKILQKNNL NLLRDLAVHI 300
AHSLRNSPDW GGVVILHRKE GDSEFMNIIA NEIGSEETLL FLTVGDEKGG GLFLLAGPPA 360
SVETLGPRVA EVLEGKGAGK KGRFQGKATK MSRRMEAQAL LQDYISTQSA KE 412 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0004813; F:alanine-tRNA ligase activity; IEA:InterPro.
 GO:0005524; F:ATP binding; IEA:InterPro.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro. 
Interpro
 IPR018165; Ala-tRNA-synth_IIc_core.
 IPR018164; Ala-tRNA-synth_IIc_N.
 IPR018163; Thr/Ala-tRNA-synth_IIc_edit.
 IPR012947; tRNA_SAD. 
Pfam
 PF01411; tRNA-synt_2c
 PF07973; tRNA_SAD 
SMART
 SM00863; tRNA_SAD 
PROSITE
 PS50860; AA_TRNA_LIGASE_II_ALA 
PRINTS