CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-028980
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Family with sequence similarity 40, member B 
Protein Synonyms/Alias
  
Gene Name
 FAM40B 
Gene Synonyms/Alias
 tcag7.908 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
797TMSAIYQKVRHRMNDubiquitination[1, 2]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789] 
Functional Description
  
Sequence Annotation
  
Keyword
  
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 893 AA 
Protein Sequence
MRSLQKNAEN SQLPETASPS FRAMSLATWR CHPSPETKRD MGRVQEPGYG GPGEPLTSSM 60
EDPAAPGTGG PPANGNGNGG GKGKQAAPKG REAFRSQRRE SEGSVDCPTL EFEYGDADGH 120
AAELSELYSY TENLEFTNNR RCFEEDFKTQ VQGKEWLELE EDAQKAYIMG LLDRLEVVSR 180
ERRLKVARAV LYLAQGTFGE CDSEVDVLHW SRYNCFLLYQ MGTFSTFLEL LHMEIDNSQA 240
CSSALRKPAV SIADSTELRV LLSVMYLMVE NIRLERETDP CGWRTARETF RTELSFSMHN 300
EEPFALLLFS MVTKFCSGLA PHFPIKKVLL LLWKVVMFTL GGFEHLQTLK VQKRAELGLP 360
PLAEDSIQVV KSMRAASPPS YTLDLGESQL APPPSKLRGR RGSRRQLLTK QDSLDIYNER 420
DLFKTEEPAT EEEEESAGDG ERTLDGELDL LEQDPLVPPP PSQAPLSAER VAFPKGLPWA 480
PKVRQKDIEH FLEMSRNKFI GFTLGQDTDT LVGLPRPIHE SVKTLKQHKY ISIADVQIKN 540
EEELEKCPMS LGEEVVPETP CEILYQGMLY SLPQYMIALL KILLAAAPTS KAKTDSINIL 600
ADVLPEEMPI TVLQSMKLGI DVNRHKEIIV KSISTLLLLL LKHFKLNHIY QFEYVSQHLV 660
FANCIPLILK FFNQNILSYI TAKNSISVLD YPCCTIQDLP ELTTESLEAG DNSQFCWRNL 720
FSCINLLRLL NKLTKWKHSR TMMLVVFKSA PILKRALKVK QAMLQLYVLK LLKLQTKYLG 780
RQWRKSNMKT MSAIYQKVRH RMNDDWAYGN DIDARPWDFQ AEECTLRANI EAFNSRRYDR 840
PQDSEFSPVD NCLQSVLGQR LDLPEDFHYS YELWLEREVF SQPICWEELL QNH 893 
Gene Ontology
  
Interpro
 IPR021819; DUF3402.
 IPR012486; N1221. 
Pfam
 PF11882; DUF3402
 PF07923; N1221 
SMART
  
PROSITE
  
PRINTS