CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023063
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Stomatin-like protein 2, mitochondrial 
Protein Synonyms/Alias
 SLP-2; EPB72-like protein 2; Paraprotein target 7; Paratarg-7 
Gene Name
 STOML2 
Gene Synonyms/Alias
 SLP2; HSPC108 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
114LRIMDPYKASYGVEDubiquitination[1]
140TMRSELGKLSLDKVFubiquitination[2, 3, 4]
145LGKLSLDKVFRERESacetylation[5]
145LGKLSLDKVFRERESubiquitination[2, 3, 4, 6]
222INVAEGKKQAQILASubiquitination[3]
233ILASEAEKAEQINQAacetylation[5]
250EASAVLAKAKAKAEAubiquitination[1, 3]
252SAVLAKAKAKAEAIRubiquitination[3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [5] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [6] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
 Mitochondrial protein that probably regulates the biogenesis and the activity of mitochondria. Stimulates cardiolipin biosynthesis, binds cardiolipin-enriched membranes where it recruits and stabilizes some proteins including prohibitin and may therefore act in the organization of functional microdomains in mitochondrial membranes. Through regulation of the mitochondrial function may play a role into several biological processes including cell migration, cell proliferation, T-cell activation, calcium homeostasis and cellular response to stress. May play a role in calcium homeostasis through negative regulation of calcium efflux from mitochondria. Required for mitochondrial hyperfusion a pro-survival cellular response to stress which results in increased ATP production by mitochondria. May also regulate the organization of functional domains at the plasma membrane and play a role in T-cell activation through association with the T-cell receptor signaling complex and its regulation. 
Sequence Annotation
 MOD_RES 17 17 Phosphoserine; by PKC/PRKCZ.
 MOD_RES 124 124 Phosphotyrosine.
 MOD_RES 145 145 N6-acetyllysine.
 MOD_RES 233 233 N6-acetyllysine.  
Keyword
 Acetylation; Cell membrane; Coiled coil; Complete proteome; Direct protein sequencing; Lipid-binding; Membrane; Mitochondrion; Mitochondrion inner membrane; Phosphoprotein; Polymorphism; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 356 AA 
Protein Sequence
MLARAARGTG ALLLRGSLLA SGRAPRRASS GLPRNTVVLF VPQQEAWVVE RMGRFHRILE 60
PGLNILIPVL DRIRYVQSLK EIVINVPEQS AVTLDNVTLQ IDGVLYLRIM DPYKASYGVE 120
DPEYAVTQLA QTTMRSELGK LSLDKVFRER ESLNASIVDA INQAADCWGI RCLRYEIKDI 180
HVPPRVKESM QMQVEAERRK RATVLESEGT RESAINVAEG KKQAQILASE AEKAEQINQA 240
AGEASAVLAK AKAKAEAIRI LAAALTQHNG DAAASLTVAE QYVSAFSKLA KDSNTILLPS 300
NPGDVTSMVA QAMGVYGALT KAPVPGTPDS LSSGSSRDVQ GTDASLDEEL DRVKMS 356 
Gene Ontology
 GO:0005856; C:cytoskeleton; TAS:ProtInc.
 GO:0019897; C:extrinsic to plasma membrane; IDA:UniProtKB.
 GO:0045121; C:membrane raft; IDA:UniProtKB.
 GO:0005743; C:mitochondrial inner membrane; IDA:UniProtKB.
 GO:0005758; C:mitochondrial intermembrane space; IDA:UniProtKB.
 GO:1901612; F:cardiolipin binding; IDA:UniProtKB.
 GO:0005102; F:receptor binding; TAS:ProtInc.
 GO:0035710; P:CD4-positive, alpha-beta T cell activation; ISS:UniProtKB.
 GO:0006874; P:cellular calcium ion homeostasis; IMP:UniProtKB.
 GO:0032623; P:interleukin-2 production; ISS:UniProtKB.
 GO:0010876; P:lipid localization; ISS:UniProtKB.
 GO:0042776; P:mitochondrial ATP synthesis coupled proton transport; IMP:UniProtKB.
 GO:0006851; P:mitochondrial calcium ion transport; IMP:UniProtKB.
 GO:0034982; P:mitochondrial protein processing; ISS:UniProtKB.
 GO:1900210; P:positive regulation of cardiolipin metabolic process; IMP:UniProtKB.
 GO:0090297; P:positive regulation of mitochondrial DNA replication; IMP:UniProtKB.
 GO:0010918; P:positive regulation of mitochondrial membrane potential; IMP:UniProtKB.
 GO:0051259; P:protein oligomerization; IDA:UniProtKB.
 GO:1990046; P:stress-induced mitochondrial fusion; ISS:UniProtKB.
 GO:0050852; P:T cell receptor signaling pathway; IMP:UniProtKB. 
Interpro
 IPR001107; Band_7.
 IPR001972; Stomatin. 
Pfam
 PF01145; Band_7 
SMART
 SM00244; PHB 
PROSITE
  
PRINTS
 PR00721; STOMATIN.