CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-033284
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 AP-4 complex subunit mu-1 
Protein Synonyms/Alias
  
Gene Name
 AP4M1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
11QFFILSSKGDPLIYKubiquitination[1]
18KGDPLIYKDFRGDSGubiquitination[1, 2, 3]
245TEEFCVGKSELRGYGubiquitination[1]
331LRCDLLSKSQALNVRubiquitination[1]
360ELSSPEQKAELAEGAubiquitination[1]
445CGNANPHKWVRHLSHubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 460 AA 
Protein Sequence
MISQFFILSS KGDPLIYKDF RGDSGGRDVA ELFYRKLTGL PGDESPVVMV TSGGRRHHHG 60
RHFIHIRHSG LYLVVTTSEN VSPFSLLELL SRLATLLGDY CGSLGEGTIS RNVALVYELL 120
DEVLDYGYVQ TTSTEMLRNF IQTEAVVSKP FSLFDLSSVG LFGAETQQSK VAPSSAASRP 180
VLSSRSDQSQ KNEVFLDVVE RLSVLIASNG SLLKVDVQGE IRLKSFLPSG SEMRIGLTEE 240
FCVGKSELRG YGPGIRVDEV SFHSSVNLDE FESHRILRLQ PPQGELTVMR YQLSDDLPSP 300
LPFRLFPSVQ WDRGSGRLQV YLKLRCDLLS KSQALNVRLH LPLPRGVVSL SQELSSPEQK 360
AELAEGALRW DLPRVQGGSQ LSGLFQMDVP GPPGPPSHGL STSASPLGLG PASLSFELPR 420
HTCSGLQVRF LRLAFRPCGN ANPHKWVRHL SHSDAYVIRI 460 
Gene Ontology
 GO:0030131; C:clathrin adaptor complex; IEA:InterPro.
 GO:0006886; P:intracellular protein transport; IEA:InterPro.
 GO:0016192; P:vesicle-mediated transport; IEA:InterPro. 
Interpro
 IPR022775; AP_mu_sigma_su.
 IPR001392; Clathrin_mu.
 IPR008968; Clathrin_mu_C.
 IPR018240; Clathrin_mu_CS.
 IPR011012; Longin-like_dom. 
Pfam
 PF00928; Adap_comp_sub
 PF01217; Clat_adaptor_s 
SMART
  
PROSITE
 PS00991; CLAT_ADAPTOR_M_2
 PS51072; MHD 
PRINTS
 PR00314; CLATHRINADPT.