CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012605
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Zinc finger HIT domain-containing protein 3 
Protein Synonyms/Alias
 HNF-4a coactivator; Thyroid hormone receptor interactor 3; Thyroid receptor-interacting protein 3; TR-interacting protein 3; TRIP-3 
Gene Name
 ZNHIT3 
Gene Synonyms/Alias
 TRIP3 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
93RVSLQNLKNLGESATubiquitination[1, 2]
123NLDQGEDKAKLMRAYubiquitination[1, 2, 3]
125DQGEDKAKLMRAYMQubiquitination[1, 2, 3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
 ZN_FING 11 42 HIT-type.
 MOD_RES 80 80 Phosphoserine.  
Keyword
 3D-structure; Complete proteome; Metal-binding; Phosphoprotein; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 155 AA 
Protein Sequence
MASLKCSTVV CVICLEKPKY RCPACRVPYC SVVCFRKHKE QCNPETRPVE KKIRSALPTK 60
TVKPVENKDD DDSIADFLNS DEEEDRVSLQ NLKNLGESAT LRSLLLNPHL RQLMVNLDQG 120
EDKAKLMRAY MQEPLFVEFA DCCLGIVEPS QNEES 155 
Gene Ontology
 GO:0005622; C:intracellular; NAS:UniProtKB.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0046966; F:thyroid hormone receptor binding; TAS:UniProtKB.
 GO:0006355; P:regulation of transcription, DNA-dependent; TAS:UniProtKB. 
Interpro
 IPR007529; Znf_HIT. 
Pfam
 PF04438; zf-HIT 
SMART
  
PROSITE
 PS51083; ZF_HIT 
PRINTS