CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-025818
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Staufen isoform b variant 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
521QGFQVEYKDFPKNNKubiquitination[1]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965] 
Functional Description
  
Sequence Annotation
  
Keyword
  
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 591 AA 
Protein Sequence
KLFTCICSLL LKVTMSQVQV QVQNPSAALS GSQILNKNQS LLSQPLMSIP STTSSLPSEN 60
AGRPIQNSAL PSASITSTSA AAESITPTVE LNALCMKLGK KPMYKPVDPY SRMQSTYNYN 120
MRGGAYPPRY FYPFPVPPLL YQVELSVGGQ QFNGKGKTRQ AAKHDAAAKA LRILQNEPLP 180
ERLEVNGRES EEENLNKSEI SQVFEIALKR NLPVNFEVAR ESGPPHMKNF VTKVSVGEFV 240
GEGEGKSKKI SKKNAAIAVL EELKKLPPLP AVERVKPRIK KKTKPIVKPQ TSPEYGQGIN 300
PISRLAQIQQ AKKEKEPEYT LLTERGLPRR REFVMQVKVG NHTAEGTGTN KKVAKRNAAE 360
NMLEILGFKV PQAQPTKPAL KSEEKTPIKK PGDGRKVTFF EPGSGDENGT SNKEDEFRMP 420
YLSHQQLPAG ILPMVPEVAQ AVGVSQGHHT KDFTRAAPNP AKATVTAMIA RELLYGGTSP 480
TAETILKNNI SSGHVPHGPL TRPSEQLDYL SRVQGFQVEY KDFPKNNKNE FVSLINCSSQ 540
PPLISHGIGK DVESCHDMAA LNILKLLSEL DQQSTEMPRT GNGPMSVCGR C 591 
Gene Ontology
 GO:0030529; C:ribonucleoprotein complex; IEA:Compara.
 GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
 GO:0008298; P:intracellular mRNA localization; IEA:Compara. 
Interpro
 IPR001159; Ds-RNA-bd.
 IPR014720; dsRNA-bd-like_dom. 
Pfam
 PF00035; dsrm 
SMART
 SM00358; DSRM 
PROSITE
 PS50137; DS_RBD 
PRINTS