CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-040779
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Zinc finger CCCH domain-containing protein 13 
Protein Synonyms/Alias
  
Gene Name
 ZC3H13 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
549SNLGPCCKALCFRRDubiquitination[1, 2]
572KNEKGTIKQAYTSAPubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 624 AA 
Protein Sequence
MCNGKNGILE DSQKKEDTAF SDWSDEDVPD RTEVTEAEHT ATATTPGSTP SPLSSLLPPP 60
PPVATATATT VPATLAATTA AAATSFSTSA ITISTSATPT NTTNNTFANE DSHRKCHRTR 120
VEKVETPHVT IEDAQHRKPM DQKRSSSLGS NRSNRSHTSG RLRSPSNDSA HRSGDDQSGR 180
KRVLHSGSRD REKTKSLEIT GERKSRIDQL KRGEPSRSTS SDRQDSRSHS SRRSSPESDR 240
QVHSRSGSFD SRDRLQERDR YEHDRERERE RRDTRQREWD RDADKDWPRN RDRDRLRERE 300
RERERDKRRD LDRERERLIS DSVERDRDRD RDRTFESSQI ESVKRCEAKL EGEHERDLES 360
TSRDSLALDK ERMDKDLGSV QGFEETNKSE RTESLEGDDE SKLDDAHSLG SGAGEGYEPI 420
SDDELDEILA GDAEKREDQQ DEEKMPDPLD VIDVDWSGLM PKHPKEPREP GAALLKFTPG 480
AVMLRVGISK KLAGSELFAK VKETCQRLLE KPKDADNLFE HELGALNMAA LLRKEERASL 540
LSNLGPCCKA LCFRRDSAIR KQLVKNEKGT IKQAYTSAPM VDNELLRLSL RLFKRKTTCH 600
APGHEKTEDN KLSQSSIQQE LCVS 624 
Gene Ontology
  
Interpro
  
Pfam
  
SMART
  
PROSITE
  
PRINTS