CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003301
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cytochrome d ubiquinol oxidase subunit 1 
Protein Synonyms/Alias
 Cytochrome bd-I oxidase subunit I; Cytochrome d ubiquinol oxidase subunit I 
Gene Name
 cydA 
Gene Synonyms/Alias
 cyd-1; b0733; JW0722 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
49LSGKQIYKDMTKFWGacetylation[1, 2]
53QIYKDMTKFWGKLFGacetylation[2]
308DTPVIGLKELMVQHEacetylation[2]
358LGYGLLLKRYTPNVAacetylation[2]
Reference
 [1] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111]
 [2] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618] 
Functional Description
 Cytochrome d terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at low aeration. 
Sequence Annotation
 METAL 186 186 Iron (heme b558 axial ligand).
 MOD_RES 1 1 N-formylmethionine.  
Keyword
 Cell inner membrane; Cell membrane; Complete proteome; Electron transport; Formylation; Heme; Iron; Membrane; Metal-binding; Oxidoreductase; Reference proteome; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 522 AA 
Protein Sequence
MLDIVELSRL QFALTAMYHF LFVPLTLGMA FLLAIMETVY VLSGKQIYKD MTKFWGKLFG 60
INFALGVATG LTMEFQFGTN WSYYSHYVGD IFGAPLAIEG LMAFFLESTF VGLFFFGWDR 120
LGKVQHMCVT WLVALGSNLS ALWILVANGW MQNPIASDFN FETMRMEMVS FSELVLNPVA 180
QVKFVHTVAS GYVTGAMFIL GISAWYMLKG RDFAFAKRSF AIAASFGMAA VLSVIVLGDE 240
SGYEMGDVQK TKLAAIEAEW ETQPAPAAFT LFGIPDQEEE TNKFAIQIPY ALGIIATRSV 300
DTPVIGLKEL MVQHEERIRN GMKAYSLLEQ LRSGSTDQAV RDQFNSMKKD LGYGLLLKRY 360
TPNVADATEA QIQQATKDSI PRVAPLYFAF RIMVACGFLL LAIIALSFWS VIRNRIGEKK 420
WLLRAALYGI PLPWIAVEAG WFVAEYGRQP WAIGEVLPTA VANSSLTAGD LIFSMVLICG 480
LYTLFLVAEL FLMFKFARLG PSSLKTGRYH FEQSSTTTQP AR 522 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0016020; C:membrane; IDA:UniProtKB.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
 GO:0009055; F:electron carrier activity; IDA:EcoCyc.
 GO:0020037; F:heme binding; IDA:EcoCyc.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0016679; F:oxidoreductase activity, acting on diphenols and related substances as donors; IDA:EcoCyc.
 GO:0017004; P:cytochrome complex assembly; IDA:EcoCyc.
 GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.
 GO:0006119; P:oxidative phosphorylation; IEA:UniProtKB-UniPathway. 
Interpro
 IPR002585; Cyt-d_ubiquinol_oxidase_suI. 
Pfam
 PF01654; Bac_Ubq_Cox 
SMART
  
PROSITE
  
PRINTS