CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012519
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Poliovirus receptor-related protein 1 
Protein Synonyms/Alias
 Herpes virus entry mediator C; Herpesvirus entry mediator C; HveC; Herpesvirus Ig-like receptor; HIgR; Nectin-1; CD111 
Gene Name
 PVRL1 
Gene Synonyms/Alias
 HVEC; PRR1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
190VSWETRLKGEAEYQEubiquitination[1]
465PKYDEDAKRPYFTVDubiquitination[1, 2]
512NDGSFISKKEWYV**ubiquitination[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Promotes cell-cell contacts by forming homophilic or heterophilic trans-dimers. Heterophilic interactions have been detected between PVRL1/nectin-1 and PVRL3/nectin-3 and between PVRL1/nectin-1 and PVRL4/nectin-4. Functions as an entry receptor for herpes simplex virus and pseudorabies virus. 
Sequence Annotation
 DOMAIN 31 141 Ig-like V-type.
 DOMAIN 149 238 Ig-like C2-type 1.
 DOMAIN 247 334 Ig-like C2-type 2.
 MOD_RES 422 422 Phosphoserine.
 MOD_RES 434 434 Phosphoserine.
 MOD_RES 435 435 Phosphoserine (By similarity).
 CARBOHYD 36 36 N-linked (GlcNAc...) (Potential).
 CARBOHYD 72 72 N-linked (GlcNAc...).
 CARBOHYD 139 139 N-linked (GlcNAc...).
 CARBOHYD 202 202 N-linked (GlcNAc...).
 CARBOHYD 286 286 N-linked (GlcNAc...) (Potential).
 CARBOHYD 297 297 N-linked (GlcNAc...) (Potential).
 CARBOHYD 307 307 N-linked (GlcNAc...) (Potential).
 CARBOHYD 332 332 N-linked (GlcNAc...).
 DISULFID 51 124
 DISULFID 172 226
 DISULFID 269 316  
Keyword
 3D-structure; Alternative splicing; Cell adhesion; Cell membrane; Complete proteome; Disulfide bond; Ectodermal dysplasia; Glycoprotein; Host cell receptor for virus entry; Host-virus interaction; Immunoglobulin domain; Membrane; Phosphoprotein; Receptor; Reference proteome; Repeat; Secreted; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 517 AA 
Protein Sequence
MARMGLAGAA GRWWGLALGL TAFFLPGVHS QVVQVNDSMY GFIGTDVVLH CSFANPLPSV 60
KITQVTWQKS TNGSKQNVAI YNPSMGVSVL APYRERVEFL RPSFTDGTIR LSRLELEDEG 120
VYICEFATFP TGNRESQLNL TVMAKPTNWI EGTQAVLRAK KGQDDKVLVA TCTSANGKPP 180
SVVSWETRLK GEAEYQEIRN PNGTVTVISR YRLVPSREAH QQSLACIVNY HMDRFKESLT 240
LNVQYEPEVT IEGFDGNWYL QRMDVKLTCK ADANPPATEY HWTTLNGSLP KGVEAQNRTL 300
FFKGPINYSL AGTYICEATN PIGTRSGQVE VNITEFPYTP SPPEHGRRAG PVPTAIIGGV 360
AGSILLVLIV VGGIVVALRR RRHTFKGDYS TKKHVYGNGY SKAGIPQHHP PMAQNLQYPD 420
DSDDEKKAGP LGGSSYEEEE EEEEGGGGGE RKVGGPHPKY DEDAKRPYFT VDEAEARQDG 480
YGDRTLGYQY DPEQLDLAEN MVSQNDGSFI SKKEWYV 517 
Gene Ontology
 GO:0005913; C:cell-cell adherens junction; IDA:BHF-UCL.
 GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; NAS:UniProtKB.
 GO:0005886; C:plasma membrane; TAS:Reactome.
 GO:0015026; F:coreceptor activity; TAS:ProtInc.
 GO:0042803; F:protein homodimerization activity; ISS:HGNC.
 GO:0034332; P:adherens junction organization; TAS:Reactome.
 GO:0034329; P:cell junction assembly; TAS:Reactome.
 GO:0002934; P:desmosome organization; IEA:Compara.
 GO:0070166; P:enamel mineralization; IEA:Compara.
 GO:0007157; P:heterophilic cell-cell adhesion; ISS:HGNC.
 GO:0007156; P:homophilic cell adhesion; ISS:HGNC.
 GO:0006955; P:immune response; NAS:UniProtKB.
 GO:0006826; P:iron ion transport; IEA:Compara.
 GO:0002089; P:lens morphogenesis in camera-type eye; IEA:Compara.
 GO:0060041; P:retina development in camera-type eye; IEA:Compara.
 GO:0046718; P:viral entry into host cell; NAS:UniProtKB. 
Interpro
 IPR013162; CD80_C2-set.
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR003599; Ig_sub.
 IPR013106; Ig_V-set.
 IPR003596; Ig_V-set_subgr. 
Pfam
 PF08205; C2-set_2
 PF07686; V-set 
SMART
 SM00409; IG
 SM00406; IGv 
PROSITE
 PS50835; IG_LIKE 
PRINTS