CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004167
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Delta-aminolevulinic acid dehydratase 
Protein Synonyms/Alias
 ALADH; Porphobilinogen synthase 
Gene Name
 ALAD 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
242GPFRDAAKSSPAFGDubiquitination[1]
281GADMLMVKPGMPYLDubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen. 
Sequence Annotation
 ACT_SITE 199 199 Schiff-base intermediate with substrate.
 ACT_SITE 252 252 Schiff-base intermediate with substrate.
 METAL 122 122 Zinc 1; catalytic.
 METAL 124 124 Zinc 1; catalytic.
 METAL 131 131 Zinc 2.
 METAL 132 132 Zinc 1; catalytic.
 METAL 223 223 Zinc 2.
 BINDING 209 209 Substrate 1.
 BINDING 221 221 Substrate 1.
 BINDING 279 279 Substrate 2.
 BINDING 318 318 Substrate 2.  
Keyword
 3D-structure; Allosteric enzyme; Alternative splicing; Complete proteome; Direct protein sequencing; Disease mutation; Heme biosynthesis; Lyase; Metal-binding; Polymorphism; Porphyrin biosynthesis; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 330 AA 
Protein Sequence
MPPTSSTPSL SRPGLGQAGK PDTGSHPPPT ISTSIFLSCF PTIPLSRPRT TGPSHSYQSI 60
SHPRSCRDVP DDIQPITSLP GVARYGVKRL EEMLRPLVEE GLRCVLIFGV PSRVPKDERG 120
SAADSEESPA IEAIHLLRKT FPNLLVACDV CLCPYTSHGH CGLLSENGAF RAEESRQRLA 180
EVALAYAKAG CQVVAPSDMM DGRVEAIKEA LMAHGLGNRV SVMSYSAKFA SCFYGPFRDA 240
AKSSPAFGDR RCYQLPPGAR GLALRAVDRD VREGADMLMV KPGMPYLDIV REVKDKHPDL 300
PLAVYHVSGE FAMLWHGAQA GAFDLKAAVL EAMTAFRRAG ADIIITYYTP QLLQWLKEE 359 
Gene Ontology
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0032791; F:lead ion binding; IDA:UniProtKB.
 GO:0004655; F:porphobilinogen synthase activity; IDA:UniProtKB.
 GO:0008270; F:zinc ion binding; IDA:UniProtKB.
 GO:0006783; P:heme biosynthetic process; IDA:UniProtKB.
 GO:0051260; P:protein homooligomerization; IPI:UniProtKB.
 GO:0006782; P:protoporphyrinogen IX biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0044281; P:small molecule metabolic process; TAS:Reactome. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR001731; Porphobilinogen_synth. 
Pfam
 PF00490; ALAD 
SMART
 SM01004; ALAD 
PROSITE
 PS00169; D_ALA_DEHYDRATASE 
PRINTS
 PR00144; DALDHYDRTASE.