CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010906
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 ADP-ribose pyrophosphatase 
Protein Synonyms/Alias
 ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase 
Gene Name
 YSA1 
Gene Synonyms/Alias
 YBR111C; YBR0907 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
55GLQKIIYKDPNGKERacetylation[1]
210KLDQQGYKLDARVQNubiquitination[2]
226AQGILMAKQYHIK**acetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
  
Sequence Annotation
 DOMAIN 75 214 Nudix hydrolase.
 REGION 64 65 Substrate binding; shared with dimeric
 MOTIF 116 137 Nudix box.
 METAL 115 115 Magnesium 1; via carbonyl oxygen (By
 METAL 131 131 Magnesium 2 (By similarity).
 METAL 131 131 Magnesium 3 (By similarity).
 METAL 135 135 Magnesium 1 (By similarity).
 METAL 135 135 Magnesium 3 (By similarity).
 METAL 185 185 Magnesium 3 (By similarity).
 BINDING 46 46 Substrate (By similarity).
 BINDING 69 69 Substrate; shared with dimeric partner
 BINDING 103 103 Substrate (By similarity).
 BINDING 117 117 Substrate; via amide nitrogen (By
 BINDING 152 152 Substrate (By similarity).  
Keyword
 Complete proteome; Hydrolase; Magnesium; Manganese; Metal-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 231 AA 
Protein Sequence
MFLRNVRVIS LNSRRLFRTM STVKGKPEDA KIIEARHVKE TSDCKWIGLQ KIIYKDPNGK 60
EREWDSAVRT TRSSGGVDGI GILTILKYKD GKPDEILLQK QFRPPVEGVC IEMPAGLIDA 120
GEDIDTAALR ELKEETGYSG KIISKSPTVF NDPGFTNTNL CLVTVEVDMS LPENQKPVTQ 180
LEDNEFIECF SVELHKFPDE MVKLDQQGYK LDARVQNVAQ GILMAKQYHI K 231 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0047631; F:ADP-ribose diphosphatase activity; IDA:SGD.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0019693; P:ribose phosphate metabolic process; IDA:SGD. 
Interpro
 IPR020084; NUDIX_hydrolase_CS.
 IPR000086; NUDIX_hydrolase_dom.
 IPR015797; NUDIX_hydrolase_dom-like. 
Pfam
 PF00293; NUDIX 
SMART
  
PROSITE
 PS51462; NUDIX
 PS00893; NUDIX_BOX 
PRINTS