CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021837
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 ADP-sugar pyrophosphatase 
Protein Synonyms/Alias
 8-oxo-dGDP phosphatase; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5 
Gene Name
 Nudt5 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
26EELISEGKWVKFEKTubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Hydrolyzes with similar activities ADP-ribose and ADP- mannose. Can also hydrolyzes ADP-glucose (40% of ADP-ribose activity) and other nucleotide sugars with low activity (10%). Does not play a role in U8 snoRNA decapping activity. Binds U8 snoRNA. 
Sequence Annotation
 DOMAIN 56 196 Nudix hydrolase.
 REGION 45 46 Substrate binding; shared with dimeric
 MOTIF 96 117 Nudix box.
 METAL 95 95 Magnesium 1; via carbonyl oxygen (By
 METAL 111 111 Magnesium 2 (By similarity).
 METAL 111 111 Magnesium 3 (By similarity).
 METAL 115 115 Magnesium 1 (By similarity).
 METAL 115 115 Magnesium 3 (By similarity).
 METAL 165 165 Magnesium 3 (By similarity).
 BINDING 27 27 Substrate (By similarity).
 BINDING 83 83 Substrate (By similarity).
 BINDING 97 97 Substrate; via amide nitrogen (By
 BINDING 132 132 Substrate (By similarity).
 MOD_RES 1 1 N-acetylmethionine (By similarity).
 MOD_RES 9 9 Phosphoserine.
 MOD_RES 10 10 Phosphoserine.
 MOD_RES 209 209 N6-acetyllysine (By similarity).
 MOD_RES 217 217 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Complete proteome; Direct protein sequencing; Hydrolase; Magnesium; Metal-binding; Phosphoprotein; Reference proteome; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 218 AA 
Protein Sequence
METRESTESS PGKHLVTSEE LISEGKWVKF EKTTYMDPTG KTRTWETVKL TTRKGKSADA 60
VSVIPVLQRT LHHECVILVK QFRPPMGSYC LEFPAGFIED GESPEAAALR ELEEETGYKG 120
EVAECSPAVC MDPGLSNCTT HVVTVTINGD DAGNVRPKPK PGDGEFMEVI SLPKNDLLTR 180
LDALGAEQHL TVDAKVYAYG LALKHANSKP FEVPFLKF 218 
Gene Ontology
 GO:0047631; F:ADP-ribose diphosphatase activity; IEA:EC.
 GO:0019144; F:ADP-sugar diphosphatase activity; ISS:UniProtKB.
 GO:0000287; F:magnesium ion binding; ISS:UniProtKB.
 GO:0017110; F:nucleoside-diphosphatase activity; IDA:MGI.
 GO:0030515; F:snoRNA binding; IDA:UniProtKB.
 GO:0009191; P:ribonucleoside diphosphate catabolic process; ISS:UniProtKB. 
Interpro
 IPR020476; Nudix_hydrolase.
 IPR020084; NUDIX_hydrolase_CS.
 IPR000086; NUDIX_hydrolase_dom.
 IPR015797; NUDIX_hydrolase_dom-like. 
Pfam
 PF00293; NUDIX 
SMART
  
PROSITE
 PS51462; NUDIX
 PS00893; NUDIX_BOX 
PRINTS
 PR00502; NUDIXFAMILY.