CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003748
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 40S ribosomal protein S16-B 
Protein Synonyms/Alias
 RP61R 
Gene Name
 RPS16B 
Gene Synonyms/Alias
 YDL083C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
30KAGKGLIKVNGSPITubiquitination[1]
47EPEILRFKVYEPLLLubiquitination[1]
59LLLVGLDKFSNIDIRubiquitination[1]
Reference
 [1] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047
Functional Description
  
Sequence Annotation
 MOD_RES 2 2 N-acetylserine.
 MOD_RES 34 34 Phosphoserine.
 MOD_RES 61 61 Phosphoserine.
 MOD_RES 70 70 Phosphothreonine.  
Keyword
 Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 143 AA 
Protein Sequence
MSAVPSVQTF GKKKSATAVA HVKAGKGLIK VNGSPITLVE PEILRFKVYE PLLLVGLDKF 60
SNIDIRVRVT GGGHVSQVYA IRQAIAKGLV AYHQKYVDEQ SKNELKKAFT SYDRTLLIAD 120
SRRPEPKKFG GKGARSRFQK SYR 143 
Gene Ontology
 GO:0022627; C:cytosolic small ribosomal subunit; NAS:SGD.
 GO:0003735; F:structural constituent of ribosome; NAS:SGD.
 GO:0002181; P:cytoplasmic translation; NAS:SGD.
 GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IGI:SGD. 
Interpro
 IPR020568; Ribosomal_S5_D2-typ_fold.
 IPR014721; Ribosomal_S5_D2-typ_fold_subgr.
 IPR000754; Ribosomal_S9.
 IPR020574; Ribosomal_S9_CS. 
Pfam
 PF00380; Ribosomal_S9 
SMART
  
PROSITE
 PS00360; RIBOSOMAL_S9 
PRINTS