CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022725
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Four and a half LIM domains protein 3 
Protein Synonyms/Alias
 FHL-3; Skeletal muscle LIM-protein 2; SLIM-2 
Gene Name
 Fhl3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
167PRCARCSKTLTQGGVubiquitination[1]
192CLVCTGCKTPLAGQQubiquitination[1]
244GAGLGGGKYVSFEDRacetylation[2, 3]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [3] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337
Functional Description
  
Sequence Annotation
 DOMAIN 40 92 LIM zinc-binding 1.
 DOMAIN 101 153 LIM zinc-binding 2.
 DOMAIN 162 212 LIM zinc-binding 3.
 DOMAIN 221 275 LIM zinc-binding 4.
 ZN_FING 7 31 C4-type (Potential).  
Keyword
 Complete proteome; LIM domain; Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 289 AA 
Protein Sequence
MSEAFDCAKC NESLYGRKYI QTDSGPYCVP CYDNTFANTC AECQQLIGHD SRELFYEDRH 60
FHEGCFRCCR CQRSLADEPF TCQDSELLCN ECYCTAFSSQ CSACGETVMP GSRKLEYGGQ 120
TWHEHCFLCS GCEQPLGSRS FVPDKGAHYC VPCYENKFAP RCARCSKTLT QGGVTYRDQP 180
WHRECLVCTG CKTPLAGQQF TSRDDDPYCV ACFGELFAPK CSSCKRPITG GSGGGEGAGL 240
GGGKYVSFED RHWHHSCFSC ARCSTSLVGQ GFVPDGDQVL CQGCSQAGP 289 
Gene Ontology
 GO:0005634; C:nucleus; IDA:MGI.
 GO:0001725; C:stress fiber; IDA:MGI.
 GO:0030018; C:Z disc; IDA:MGI.
 GO:0003779; F:actin binding; IDA:MGI.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0030036; P:actin cytoskeleton organization; IDA:MGI. 
Interpro
 IPR001781; Znf_LIM. 
Pfam
 PF00412; LIM 
SMART
 SM00132; LIM 
PROSITE
 PS00478; LIM_DOMAIN_1
 PS50023; LIM_DOMAIN_2 
PRINTS