CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035500
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 AT rich interactive domain 1A (Swi1 like) (Predicted) 
Protein Synonyms/Alias
 Protein Arid1a 
Gene Name
 Arid1a 
Gene Synonyms/Alias
 Arid1a_predicted; rCG_30872 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
1240PFLHSGMKMQKAGPPacetylation[1]
1434SEEKLVSKFDKLPVKacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1911 AA 
Protein Sequence
MDQMGKMRPQ PYGGTNPYSQ QQGPPSGPQQ GHGYPGQPYG SQTPQRYPMT MQGRAQSAMG 60
SLSYAQQIPP YGQQGPSAYG QQGQTPYYNQ QSPHPQQQQQ PPYSQQPPSQ TPHAQPSYQQ 120
QPQTQQPQLQ SSQPPYSQQP SQPPHQQSQT PYPSQQSTTQ QHPQSQPPYS QPQAQAPYQQ 180
QQPQQPASST LSQQAAYPQP QPQQSQQTAY SQQRFPPPQE LSQDSFGSQA SSAPSMTSSK 240
GGQEDMNLSL QSRPSSLPDL SGSIDDLPMG TEGALSPGVS TSGISSSQGE QSNPAQSPFS 300
PHTSPHLPGI RGPSPSPVGS PASVAQSRSG PLSPAAVPGN QMPPRPPSGQ SDSIMHPSMN 360
QSSIAQDRGY MQRNPQMPQY TSPQPGSALS PRQPSGGQMH SGMGSYQQNS MGSYGPQGSQ 420
YGPQGGYPRQ PNYNALPNAN YPSAGMAGSM NPLGAGGQMH GQPGIPPYGT LPPGRMTHAS 480
MGNRPYGPNM ANMPPQVGSG MCPPPGGMNR KTQESAVAMH VAANSIQNRP PGYPNMNQGG 540
IMGTGPPYGQ GINSMAGMIN PQGPPYPMGG TMANNSAGMA ASPEMMGLGD VKLTPATKMN 600
NKADGTPKTE SKSKKSSSST TTNEKITKLY ELGGEPERKM WVDRYLAFTE EKAMGMTNLP 660
AVGRKPLDLY RLYVSVKEIG GLTQVNKNKK WRELATNLNV GTSSSAASSL KKQYIQCLYA 720
FECKIERGED PPPDIFAAAD SKKSQPKIQP PSPAGSGSMQ GPQTPQSTSS SMAEGGDLKP 780
PTPASTPHSQ IPPLPGMRSN SVGIQDAFPD GSEPTFQKRN SMTPNPGYQP SMNTSDMMGR 840
MSYEPNKDPY GGMRKAPGSD PFMSSGQGPN GGMGDPYSRA AGPGLGNVAM GPRQHYPYGG 900
PYDRVRTEPG IGPEGNMGTG APQPNLMPST PDSGMYSPSR YPPQQQQQQQ QQQQQQQQQQ 960
QRHDSYGNQF STQGTPSSSP FPSQQTTMYQ QQQQQNYKRP MDGTYGPPAK RHEGELYSVP 1020
YSTGQGQPQQ QQLPAAQSQS ASQPQAAQPS PQQDVYNQYS NAYPATATAA TERRPAGGPQ 1080
NQFPFQFGRD RVSAPPGSNA QQNMPPQMMG GPIQASAEVA QQGTMWQGRN DMTYNYANRQ 1140
NTGSAPQGPA YHGVNRTDEM LHTDQRANHE GPWPSHGTRQ PPYGPSAPVP PMTRPPPSNY 1200
QPPPSMQNHI PQVSSPAPLP RPMENRTSPS KSPFLHSGMK MQKAGPPVPA SHIAPTPVQP 1260
PMIRRDITFP PGSVEATQPV LKQRRRLTMK DIGTPEAWRV MMSLKSGLLA ESTWALDTIN 1320
ILLYDDNSIM TFNLSQLPGL LELLVEYFRR CLIEIFGILK EYEVGDPGQR TLLDPGRLTK 1380
VSSPAPTEEE EEEEHVDPKL EEEEEEGVEN DEEMAFLGKD KPPSEKSEEK LVSKFDKLPV 1440
KIVQKNDPFV VDCSDKLGRV QEFDSGLLHW RIGGGDTTEH IQTHFESKIE LLPSRPCVPS 1500
PVPPRKHVTT VEGTPGTTEQ EGPPPDGLPE KRITATMDDM LSTRSSTLTD EGTKSTEANK 1560
ESSKFPFGIS PAQSHRNIKI LEDEPHSKDE TPLCTLLDWQ DSLAKRCVCV SNAIRSLSFV 1620
PGNDFEMSKH PGLLLILGKL ILLHHKHPER KQAPLTYEKE EEQDQGVSCD KVEWWWDCLE 1680
MLRENTLVTL ANISGQLDLS PYPESICLPV LDGLLHWAVC PSAEAQDPFS TLGPNAVLSP 1740
QRLVLETLSK LSIQDNNVDL ILATPPFSRL EKLYSTMVRF LSDRKNPVCR EMAVVLLANL 1800
AQGDSLAARA IAVQKGSIGN LLGFLEDSLA ATQFQQSQAS LLHMQSPPFE PTSVDMMRRA 1860
ARALLALAKV DENHSEFTLY ESRLLDISVS PLMNSLVSQV ICDVLFLIGQ S 1911 
Gene Ontology
 GO:0071565; C:nBAF complex; IEA:Compara.
 GO:0071564; C:npBAF complex; IEA:Compara.
 GO:0000790; C:nuclear chromatin; IEA:Compara.
 GO:0016514; C:SWI/SNF complex; IEA:Compara.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0030521; P:androgen receptor signaling pathway; IEA:Compara.
 GO:0006338; P:chromatin remodeling; IEA:Compara.
 GO:0042921; P:glucocorticoid receptor signaling pathway; IEA:Compara.
 GO:0030520; P:intracellular estrogen receptor signaling pathway; IEA:Compara.
 GO:0006337; P:nucleosome disassembly; IEA:Compara.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:Compara. 
Interpro
 IPR001606; ARID/BRIGHT_DNA-bd.
 IPR021906; DUF3518. 
Pfam
 PF01388; ARID
 PF12031; DUF3518 
SMART
 SM00501; BRIGHT 
PROSITE
 PS51011; ARID 
PRINTS