CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016383
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Acyl-coenzyme A synthetase ACSM5, mitochondrial 
Protein Synonyms/Alias
  
Gene Name
 Acsm5 
Gene Synonyms/Alias
 Macs3 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
96WTFEELGKQSRKAANacetylation[1, 2, 3, 4, 5]
96WTFEELGKQSRKAANsuccinylation[4]
151GVSQLTAKDLKYRLQacetylation[2, 3, 5]
154QLTAKDLKYRLQAARacetylation[5]
302ELPRVDAKTILNTLCacetylation[1, 3, 4, 5]
302ELPRVDAKTILNTLCsuccinylation[4]
335QEDLTRYKFQCLRHCacetylation[1, 2, 3, 5]
540RELQEHVKTVTAPYKacetylation[2, 3, 4]
540RELQEHVKTVTAPYKsuccinylation[4]
547KTVTAPYKYPRKVAFacetylation[2, 3]
551APYKYPRKVAFISELacetylation[4]
551APYKYPRKVAFISELsuccinylation[4]
Reference
 [1] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [2] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [3] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [4] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [5] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654
Functional Description
 Has medium-chain fatty acid:CoA ligase activity with broad substrate specificity (in vitro). Acts on acids from C(4) to C(11) and on the corresponding 3-hydroxy- and 2,3- or 3,4- unsaturated acids (in vitro) (By similarity). 
Sequence Annotation
 NP_BIND 229 237 ATP (By similarity).
 NP_BIND 367 372 ATP (By similarity).
 BINDING 454 454 ATP (By similarity).
 BINDING 469 469 ATP (By similarity).
 BINDING 565 565 ATP (By similarity).  
Keyword
 Alternative splicing; ATP-binding; Complete proteome; Fatty acid metabolism; Ligase; Lipid metabolism; Magnesium; Metal-binding; Mitochondrion; Nucleotide-binding; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 578 AA 
Protein Sequence
MRLWLRGLAC QALRSSWGVC RIHTQPPPPP IPEVVATWEA ISLGRQPVPE YFNFAHDVLD 60
VWSQLEKTGH RPPNPAFWWV NGSGTEVKWT FEELGKQSRK AANVLEGVCG LQPGDRMMLV 120
LPRLPDWWLI SVACMRTGVV MIPGVSQLTA KDLKYRLQAA RAKSIVTSDA LAPQVDAISA 180
DCPSLQTKLL VSDTSRPGWI NFRELLRAAS PEHNCVRTRS GDSVAIYFTS GTTGAPKMVE 240
HSQSSYGLGF VASGRRWMAL TESDIFWNTT DTGWVKAAWT LFSAWSNGAC IFVHELPRVD 300
AKTILNTLCR FPITTLCCVP TLFRLLVQED LTRYKFQCLR HCLTGGEALN PDVRDKWKSQ 360
TGLELHEGYG QSETVVICGN SRNSTIKSGS MGKASPPYDV QIVDEEGNVL PPGKEGNIAV 420
RIKPTRPFCF FNCYLDNPEK TAASEQGDFY ITGDRAHMDE DGYFWFLGRN DDVINSSSYR 480
IGPVEVESAL AEHPAVLESA VVSSPDPIRG EVVKAFIVLS PAYASHDPEA LTRELQEHVK 540
TVTAPYKYPR KVAFISELPK TVSGKILRSK LRNQEWGR 578 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0047760; F:butyrate-CoA ligase activity; IEA:EC.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0006631; P:fatty acid metabolic process; IEA:UniProtKB-KW. 
Interpro
 IPR020845; AMP-binding_CS.
 IPR000873; AMP-dep_Synth/Lig.
 IPR025110; DUF4009. 
Pfam
 PF00501; AMP-binding
 PF13193; DUF4009 
SMART
  
PROSITE
 PS00455; AMP_BINDING 
PRINTS