CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006746
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Psp operon transcriptional activator 
Protein Synonyms/Alias
 Phage shock protein F 
Gene Name
 pspF 
Gene Synonyms/Alias
 ycjB; b1303; JW1296 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
202IQMCREIKLPLFPGFacetylation[1]
256DIIIDPFKRRPPEDAacetylation[1]
299QLSLQQGKYNQKRAAacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Transcriptional activator for the phage shock protein (psp) operon (pspABCDE) and pspG gene. 
Sequence Annotation
 DOMAIN 15 237 Sigma-54 factor interaction.
 NP_BIND 36 43 ATP (Potential).
 NP_BIND 99 108 ATP (Potential).
 DNA_BIND 302 321 H-T-H motif (By similarity).  
Keyword
 3D-structure; Activator; ATP-binding; Complete proteome; Cytoplasm; DNA-binding; Nucleotide-binding; Reference proteome; Transcription; Transcription regulation; Two-component regulatory system. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 325 AA 
Protein Sequence
MAEYKDNLLG EANSFLEVLE QVSHLAPLDK PVLIIGERGT GKELIASRLH YLSSRWQGPF 60
ISLNCAALNE NLLDSELFGH EAGAFTGAQK RHPGRFERAD GGTLFLDELA TAPMMVQEKL 120
LRVIEYGELE RVGGSQPLQV NVRLVCATNA DLPAMVNEGT FRADLLDRLA FDVVQLPPLR 180
ERESDIMLMA EYFAIQMCRE IKLPLFPGFT ERARETLLNY RWPGNIRELK NVVERSVYRH 240
GTSDYPLDDI IIDPFKRRPP EDAIAVSETT SLPTLPLDLR EFQMQQEKEL LQLSLQQGKY 300
NQKRAAELLG LTYHQFRALL KKHQI 325 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:EcoCyc.
 GO:0000160; P:phosphorelay signal transduction system; IEA:UniProtKB-KW.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:EcoCyc.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR003593; AAA+_ATPase.
 IPR009057; Homeodomain-like.
 IPR002197; HTH_Fis.
 IPR027417; P-loop_NTPase.
 IPR002078; Sigma_54_int.
 IPR025943; Sigma_54_int_dom_ATP-bd_2.
 IPR025944; Sigma_54_int_dom_CS.
 IPR014317; Transcription_activator_PspF. 
Pfam
 PF02954; HTH_8
 PF00158; Sigma54_activat 
SMART
 SM00382; AAA 
PROSITE
 PS00675; SIGMA54_INTERACT_1
 PS00676; SIGMA54_INTERACT_2
 PS00688; SIGMA54_INTERACT_3
 PS50045; SIGMA54_INTERACT_4 
PRINTS
 PR01590; HTHFIS.