CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011143
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 High mobility group protein 1 
Protein Synonyms/Alias
 High spontaneous mutagenesis protein 2 
Gene Name
 HMO1 
Gene Synonyms/Alias
 HSM2; YDR174W; YD9395.07 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
13SVKLKSAKDSLVSSLacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 DNA-binding protein that is probably part of the rDNA transcription apparatus. Acts synergetically with the RPA49 subunit of RNA polymerase I during rDNA transcription. May participate in mutagenesis control. 
Sequence Annotation
 DNA_BIND 106 179 HMG box.  
Keyword
 Complete proteome; Direct protein sequencing; DNA-binding; Nucleus; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 246 AA 
Protein Sequence
MTTDPSVKLK SAKDSLVSSL FELSKAANQT ASSIVDFYNA IGDDEEEKIE AFTTLTESLQ 60
TLTSGVNHLH GISSELVNPI DDDKDAIIAA PVKAVRRKIE RDPNAPKKPL TVFFAYSAYV 120
RQELREDRQK AGLPPLSSTE ITQEISKKWK ELSDNEKEKW KQAYNVELEN YQREKSKYLE 180
AKKNGTLPPA SLENGPTHAP VPIPFSLQHA AEPPVEKRPH DDDGSSEKKK KKKKKDKKKD 240
KSNSSI 246 
Gene Ontology
 GO:0005829; C:cytosol; IDA:SGD.
 GO:0005730; C:nucleolus; IDA:SGD.
 GO:0008301; F:DNA binding, bending; IDA:SGD.
 GO:0003690; F:double-stranded DNA binding; IDA:SGD.
 GO:0000400; F:four-way junction DNA binding; IDA:SGD.
 GO:0060962; P:regulation of ribosomal protein gene transcription from RNA polymerase II promoter; IMP:SGD.
 GO:0034401; P:regulation of transcription by chromatin organization; IDA:SGD.
 GO:0006356; P:regulation of transcription from RNA polymerase I promoter; IMP:SGD.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR009071; HMG_box_dom. 
Pfam
 PF00505; HMG_box 
SMART
 SM00398; HMG 
PROSITE
 PS00353; HMG_BOX_1
 PS50118; HMG_BOX_2 
PRINTS