CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022865
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Peflin 
Protein Synonyms/Alias
 PEF protein with a long N-terminal hydrophobic domain; Penta-EF hand domain-containing protein 1 
Gene Name
 PEF1 
Gene Synonyms/Alias
 ABP32; UNQ1845/PRO3573 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
260LTEAFREKDTAVQGNubiquitination[1, 2, 3]
Reference
 [1] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.
 Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.
 J Proteome Res. 2012 Feb 3;11(2):796-807. [PMID: 22053931]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
 REPEAT 21 29 1.
 REPEAT 31 39 2.
 REPEAT 41 49 3.
 REPEAT 50 58 4.
 REPEAT 59 67 5.
 REPEAT 76 84 6.
 REPEAT 85 92 7.
 REPEAT 93 100 8.
 REPEAT 101 109 9.
 DOMAIN 114 149 EF-hand 1.
 DOMAIN 155 183 EF-hand 2.
 DOMAIN 181 216 EF-hand 3.
 DOMAIN 217 253 EF-hand 4.
 DOMAIN 254 283 EF-hand 5.
 REGION 21 109 9 X 9 AA approximate tandem repeat of
 REGION 204 284 Required for interaction with PDCD6.  
Keyword
 Calcium; Complete proteome; Cytoplasm; Membrane; Metal-binding; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 284 AA 
Protein Sequence
MASYPYRQGC PGAAGQAPGA PPGSYYPGPP NSGGQYGSGL PPGGGYGGPA PGGPYGPPAG 60
GGPYGHPNPG MFPSGTPGGP YGGAAPGGPY GQPPPSSYGA QQPGLYGQGG APPNVDPEAY 120
SWFQSVDSDH SGYISMKELK QALVNCNWSS FNDETCLMMI NMFDKTKSGR IDVYGFSALW 180
KFIQQWKNLF QQYDRDRSGS ISYTELQQAL SQMGYNLSPQ FTQLLVSRYC PRSANPAMQL 240
DRFIQVCTQL QVLTEAFREK DTAVQGNIRL SFEDFVTMTA SRML 284 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:UniProtKB.
 GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
 GO:0005509; F:calcium ion binding; TAS:ProtInc.
 GO:0051592; P:response to calcium ion; IPI:UniProtKB. 
Interpro
 IPR011992; EF-hand-like_dom.
 IPR018247; EF_Hand_1_Ca_BS.
 IPR002048; EF_hand_dom. 
Pfam
 PF13499; EF_hand_5 
SMART
 SM00054; EFh 
PROSITE
 PS00018; EF_HAND_1
 PS50222; EF_HAND_2 
PRINTS