CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-026281
UniProt Accession
Q5T7C6_HUMAN
;
Q5T7C6
Genbank Protein ID
AL138681
;
AL353648
Genbank Nucleotide ID
Protein Name
High mobility group protein B1
Protein Synonyms/Alias
Gene Name
HMGB1
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Homo sapiens (Human)
NCBI Taxa ID
9606
Lysine Modification
Position
Peptide
Type
References
59
MSAKEKG
K
FEDMAKA
ubiquitination
[1]
Reference
[1] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
Chen Z, Zhou Y, Song J, Zhang Z.
Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [
PMID: 23603789
]
Functional Description
Sequence Annotation
Keyword
Complete proteome; Reference proteome.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
162 AA
Protein Sequence
MGKGDPKKPR GKMSSYAFFV QTCREEHKKK HPDASVNFSE FSKKCSERWK TMSAKEKGKF 60
EDMAKADKAR YEREMKTYIP PKGETKKKFK DPNAPKRPPS AFFLFCSEYR PKIKGEHPGL 120
SIGDVAKKLG EMWNNTAADD KQPYEKILLH IELKESLMQQ KR 162
Gene Ontology
GO:0005634
; C:nucleus; IEA:InterPro.
GO:0003677
; F:DNA binding; IEA:InterPro.
Interpro
IPR009071
; HMG_box_dom.
IPR017967
; HMG_boxA_CS.
Pfam
PF09011
; DUF1898
PF00505
; HMG_box
SMART
SM00398
; HMG
PROSITE
PS00353
; HMG_BOX_1
PS50118
; HMG_BOX_2
PRINTS