CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-025660
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RAB13 protein 
Protein Synonyms/Alias
  
Gene Name
 RAB13 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
44PPVSAMAKAYDHLFKubiquitination[1]
112TAGQERFKTITTAYYubiquitination[1]
145ENIQNWMKSIKENASubiquitination[1]
163ERLLLGNKCDMEAKRubiquitination[1]
213LARDILLKSGGRRSGubiquitination[1]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
  
Sequence Annotation
  
Keyword
 GTP-binding; Nucleotide-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 244 AA 
Protein Sequence
AEREENFFLA WAPCRSVCQP SSPAYQCRAL PTPPPAPPVS AMAKAYDHLF KLLLIGDSGV 60
GKTCLIIRFA EDNFNNTYIS TIGIDFKIRT VDIEGKKIKL QVWDTAGQER FKTITTAYYR 120
GAMGIILVYD ITDEKSFENI QNWMKSIKEN ASAGVERLLL GNKCDMEAKR KVQKEQADKL 180
AREHGIRFFE TSAKSSMNVD EAFSSLARDI LLKSGGRRSG NGNKPPSTDL KTCDKKNTNK 240
CSLG 244 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:HPA.
 GO:0005794; C:Golgi apparatus; IEA:Compara.
 GO:0005886; C:plasma membrane; IDA:HPA.
 GO:0005923; C:tight junction; IEA:Compara.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0015031; P:protein transport; IEA:InterPro.
 GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase.
 IPR003579; Small_GTPase_Rab_type. 
Pfam
 PF00071; Ras 
SMART
 SM00175; RAB 
PROSITE
  
PRINTS
 PR00449; RASTRNSFRMNG.