CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018686
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 UBX domain-containing protein 1 
Protein Synonyms/Alias
 Protein 2B28; SAPK substrate protein 1; UBA/UBX 33.3 kDa protein; mY33K 
Gene Name
 Ubxn1 
Gene Synonyms/Alias
 D19Ertd721e; Saks1 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
96EERQEQTKRMLELVAubiquitination[1]
105MLELVAQKQREREERubiquitination[1]
137ELSVARQKLQEDEMRubiquitination[1]
154AEERRREKAEELAARubiquitination[1]
208PSQEPPTKREYDQCRubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Ubiquitin-binding protein that interacts with the BRCA1- BARD1 heterodimer, and regulates its activity. Specifically binds 'Lys-6'-linked polyubiquitin chains. Interaction with autoubiquitinated BRCA1, leads to inhibit the E3 ubiquitin-protein ligase activity of the BRCA1-BARD1 heterodimer (By similarity) Component of a complex required to couple deglycosylation and proteasome-mediated degradation of misfolded proteins in the endoplasmic reticulum that are retrotranslocated in the cytosol. Involved in ubiquitin-proteasome systems. 
Sequence Annotation
 DOMAIN 1 42 UBA.
 DOMAIN 209 291 UBX.
 REGION 43 297 Interaction with BRCA1 (By similarity).
 MOD_RES 2 2 N-acetylalanine (By similarity).
 MOD_RES 187 187 Phosphoserine.
 MOD_RES 192 192 Phosphothreonine.
 MOD_RES 199 199 Phosphoserine (By similarity).
 MOD_RES 200 200 Phosphoserine; by MAPK12 (By similarity).
 MOD_RES 270 270 Phosphoserine (By similarity).  
Keyword
 3D-structure; Acetylation; Coiled coil; Complete proteome; Cytoplasm; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 297 AA 
Protein Sequence
MAELTALESL IEMGFPRGRA EKALALTGNQ GIEAAMDWLM EHEDDPDVDE PLETPLSHVL 60
GREPTPSEQV GPEGSGSAAG ESRPILTEEE RQEQTKRMLE LVAQKQRERE EREEREALER 120
EKQRRRQGQE LSVARQKLQE DEMRRAAEER RREKAEELAA RQRVREKIER DKAERAKKYG 180
GSVGSRSSPP ATDPGPVPSS PSQEPPTKRE YDQCRIQVRL PDGTSLTQTF RAREQLAAVR 240
LYVELHRGEE PGQDQDPVQL LSGFPRRAFS EADMERPLQE LGLVPSAVLI VAKKCPS 297 
Gene Ontology
 GO:0034098; C:Cdc48p-Npl4p-Ufd1p AAA ATPase complex; IEA:Compara.
 GO:0030425; C:dendrite; IEA:Compara.
 GO:0043025; C:neuronal cell body; IEA:Compara.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0000502; C:proteasome complex; IEA:Compara.
 GO:0071796; F:K6-linked polyubiquitin binding; ISS:UniProtKB.
 GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
 GO:0031397; P:negative regulation of protein ubiquitination; ISS:UniProtKB. 
Interpro
 IPR009060; UBA-like.
 IPR000449; UBA/transl_elong_EF1B_N.
 IPR015940; UBA/transl_elong_EF1B_N_euk.
 IPR001012; UBX. 
Pfam
 PF00627; UBA
 PF00789; UBX 
SMART
 SM00165; UBA
 SM00166; UBX 
PROSITE
 PS50030; UBA
 PS50033; UBX 
PRINTS