CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010351
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Uncharacterized HTH-type transcriptional regulator YdjF 
Protein Synonyms/Alias
  
Gene Name
 ydjF 
Gene Synonyms/Alias
 b1770; JW1759 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
42TIRRDLEKLEDEGFLacetylation[1]
71TENIHFYKRASSFYEacetylation[1]
80ASSFYEEKQLIARKAacetylation[1]
158SLQGRITKEIIRRYHacetylation[1]
211ALLVDHSKFDRKAFVacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618] 
Functional Description
  
Sequence Annotation
 DOMAIN 3 58 HTH deoR-type.
 DNA_BIND 20 39 H-T-H motif (Potential).  
Keyword
 Complete proteome; DNA-binding; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 252 AA 
Protein Sequence
MAAKDRIQAI KQMVANDKKV TVSNLSGIFQ VTEETIRRDL EKLEDEGFLT RTYGGAVLNT 60
AMLTENIHFY KRASSFYEEK QLIARKALPF IDNKTTMAAD SSSTVMELLK LLQDRSGLTL 120
LTNSAEAIHV LAQSEIKVVS TGGELNKNTL SLQGRITKEI IRRYHVDIMV MSCKGLDINS 180
GALDSNEAEA EIKKTMIRQA TEVALLVDHS KFDRKAFVQL ADFSHINYII TDKSPGAEWI 240
AFCKDNNIQL VW 252 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR014036; DeoR_C.
 IPR001034; HTH_DeoR_N.
 IPR018356; Tscrpt_reg_HTH_DeoR_CS.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF00455; DeoRC
 PF08220; HTH_DeoR 
SMART
 SM00420; HTH_DEOR 
PROSITE
 PS00894; HTH_DEOR_1
 PS51000; HTH_DEOR_2 
PRINTS
 PR00037; HTHLACR.