CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006372
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Peptidyl-tRNA hydrolase 2 
Protein Synonyms/Alias
 PTH 2 
Gene Name
 PTH2 
Gene Synonyms/Alias
 YBL057C; YBL0510; YBL0514 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
152ITLKCPDKFTMDELYubiquitination[1, 2, 3]
161TMDELYAKAISLGVNubiquitination[1]
206DQITGDLKLY*****ubiquitination[3]
Reference
 [1] A subset of membrane-associated proteins is ubiquitinated in response to mutations in the endoplasmic reticulum degradation machinery.
 Hitchcock AL, Auld K, Gygi SP, Silver PA.
 Proc Natl Acad Sci U S A. 2003 Oct 28;100(22):12735-40. [PMID: 14557538]
 [2] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047]
 [3] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity). 
Sequence Annotation
 CROSSLNK 152 152 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Complete proteome; Cytoplasm; Hydrolase; Isopeptide bond; Reference proteome; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 208 AA 
Protein Sequence
MEKMTVSSNY TIALWATFTA ISFAVGYQLG TSNASSTKKS SATLLRSKEM KEGKLHNDTD 60
EEESESEDES DEDEDIESTS LNDIPGEVRM ALVIRQDLGM TKGKIAAQCC HAALSCFRHI 120
ATNPARASYN PIMTQRWLNA GQAKITLKCP DKFTMDELYA KAISLGVNAA VIHDAGRTQI 180
AAGSATVLGL GPAPKAVLDQ ITGDLKLY 208 
Gene Ontology
 GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
 GO:0004045; F:aminoacyl-tRNA hydrolase activity; IDA:SGD.
 GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:SGD. 
Interpro
 IPR023476; Pep_tRNA_hydro_II_dom.
 IPR002833; Pep_tRNA_hydro_PTH2. 
Pfam
 PF01981; PTH2 
SMART
  
PROSITE
  
PRINTS