CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035651
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Vps13a 
Protein Synonyms/Alias
  
Gene Name
 Vps13a 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
763DIKMPKFKIFGKLPLacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 2335 AA 
Protein Sequence
MVFESVVVDV LNRFLGDYVV NLDQSQLSLG IWKGAVVLKN LVIKENALHE LDVPFKVKVG 60
RIGSLQLKIP WKNLYTQPVE AVLEEIYLLI VPSSRIQYDP IKEEKQLMEA KQQELKRIEE 120
AKQKVVDQEN PREEKQDTFA EKLVTQIIKN LQVQISSIHV RYEDDITNRE KPLSFGISLQ 180
NLSLQTTDQY WIPCLHDDTE KLVRKLIRLD NLFAYWNVNS EMFYLNDYDD ALEALKNGIV 240
NENIIPEGYD FVFRPISANA KLQMNRRSDF DFSDPKINLD IELHTIVIEF NKPQYFSLME 300
LLESIDMMTQ NLPYRKFKPS VPLHLHAEEW WAYAIHGILE VNVCPSLRMW SWEHIKNHRY 360
KMKQYREFYK KKLTNKKPSP EILMSLEELE KTLDVFNITI ARQQAEVEVK KAGYKIYKEG 420
LKDPEDNAGW FSWMWSWSES NANQQQDVKP GILAEMLTPE EKALLYEAIG YSETAVDPTL 480
PKTFEALKFF VHLKSMSIVL RENRQKPELL NVVVEGLSTS IVQRPGAQAL KFETKIDSFH 540
ITGLPDDFKK PHLLSSLDDM SLFRITFEIN PLDETVSQRC TIEAEPLEMI YDARTVNSIV 600
EFFRPPKDVR LAQLTTATLT KLEEFREKTA TGLLYIIETQ KVLDLRINVK ASYVIVPQYG 660
NFSPTSNLLL LDLGHLKVTS KRRSGLPDVK PSGASLEDIM HRAYDSFDIQ LSSIQLLYSR 720
VGDNWKEARK LNVSTQHILI PMHVNIELSK AMVFMDIKMP KFKIFGKLPL VSLRISDKKL 780
QGIMELLESI PKPEPVTDVS APARSFQIQA STMPVSHISQ KLIPLLEQSA TEDDSEEEFF 840
DAPCSPLEEY PQVSCRVEST RRKKLQKKDG SMNFIQLSMR FEVAEVLIQF YHLVGDCELP 900
VLEMGVLGLG TEVEIRKFDL KGNAFLKELW LKCPGYLDEH KKPVYLITTL DNTMEDLLTL 960
EFMRVEKNAP NLNSTYNNVL QLIKVNFSSL DIHLHTEALL NTMNYLNNIL PELGETSASV 1020
SAAEPEDKGD IIKKLALKLP TNEDIITLQL LAELSCLRIF IQDQKQNISE IKIEGLDSEM 1080
IMKPLVTEIN AKLRNIIVLD SDKMAVYKKA VYITGKEVFS FKMISYMDAT AGYAYTDMSV 1140
VDARVYLTVG CIEVVFVTKF LYSILAFINN FQAVKNALAE ATVQAAGMAA DGVKELARKS 1200
SRFALDVNIK APVVLIPQSP VSRNVFVADF GLITIKNIFV TVTETQSNIP PVIDLITIKL 1260
SKMRLYRSQF MNNTYQEVLD LLLPLNLEVI VERNLSWEWY KEVPCFNIKA QLKPMEFILS 1320
QEDLTTVFQT LYGNIWYGRD VPAPSSVNKG PEIMTTEVTS TSYHSGATMV TSAVVEVHPQ 1380
ASPANTTLNV SFQTDHLIMT LYSPGPDQAS FTDVRDPSLE LAEFKLENII SDLKVYTDDS 1440
MVFSFSLKNC ILDDKRPHVM KATPRMIGLT VGFDKKDMVD VKYRQIRDVF VTDVVVQEMY 1500
VCASVEFLMT VARVFFDAYM TSTALETSVQ TWTTREAPVQ ELRKWEMNIL IKNPEIVFVA 1560
DMTRNDAPAL VITTQCEICC KGEPESNTVT AAIKDFQVRA CPFLPVKRKG RVTTVLQPCD 1620
LFYQATQFGT DPQTIDISVK SLTLKVSPVI INTIITVTSA LYTTKETVPE ESTSNVAHLW 1680
DKKDTKNLKM WFLEESNETE KVVPTDEVMP GGETLNLNID SIFIVLEAGI GHRTVPMLLA 1740
KSSFLGESKN WRTLINLHCQ LELEVHYFNE MFGVWEPLLE PLEIDQSDDF RPWNLGIKMK 1800
KKAKEAIVES DSEEENYKVP EYKTAISFFS RDQLNITLSK CGLVMLSNLV EAFTEAATGS 1860
SAVFLRDLAP FMILNSLGLT VSVSPSDSFH VLNVPLAKSY ELKNEESLSM DYVRTKDNDH 1920
FNAMTSLSSK LFFILLTPAN HSVADKIPLT KVGRRLYTVR HRESGVERSI ICQIDTVEGS 1980
KKVTIRSPVQ IKNHFSIPIS VFEGDTLLGI ASPENEFNIP LASYRSSLSL KPEDEDYQLC 2040
EGIDFEEIIK HDGQLLKKKC RSISPSKKSF VINIVPEKDN LASLSAYSED GWDLPYVMHL 2100
WPPILIRNLL PYKIAYYLEG IENTVCTLSE GHSSQIYNVE MDQAKLHLKL LDYLNHDWKS 2160
EFQIDPNQQD INFINFTCLT EMEKSDLDIA IHMTYNTGQT VVAFHSPYWM VNKTNRMLQY 2220
KADGIHRKHP PNYKKPVLFS FQPNHFFNNN KVQLMVTDSE LSDQFSIDTV GSHGAIKCKG 2280
LKMEYQVGVT IDLSSFNITR IVTFIPFYMI KNKSRYHISV TEEGSDKWLS LDLEQ 2335 
Gene Ontology
 GO:0007626; P:locomotory behavior; IEA:Compara.
 GO:0007399; P:nervous system development; IEA:Compara.
 GO:0035176; P:social behavior; IEA:Compara. 
Interpro
 IPR026847; VPS13.
 IPR026854; VPS13A_N.
 IPR009543; VPSAP_dom. 
Pfam
 PF12624; Chorein_N
 PF06650; DUF1162 
SMART
  
PROSITE
  
PRINTS