UniProt Accession

 D3ZLH8_RAT; D3ZLH8 

Genbank Protein ID

 AABR06025801; AABR06025802; CH473949 

Genbank Nucleotide ID

 EDL79922.1 

Protein Name

 Protein Rtf1 

Protein Synonyms/Alias

 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (Predicted) 

Gene Name

 Rtf1 

Gene Synonyms/Alias

 Rtf1_predicted; rCG_27062 

Created Date

 July 27, 2013 

Organism

 Rattus norvegicus (Rat) 

NCBI Taxa ID

 10116 

Lysine Modification

Position	Peptide	Type	References
132	TGVVETAKVYQLGGT	acetylation	[1]

Reference

 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 

Functional Description

  

Sequence Annotation

  

Keyword

 Complete proteome; Reference proteome. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 429 AA 

Protein Sequence

Gene Ontology

 GO:0016593; C:Cdc73/Paf1 complex; IEA:Compara.
 GO:0005730; C:nucleolus; IEA:Compara.
 GO:0003697; F:single-stranded DNA binding; IEA:Compara.
 GO:0006352; P:DNA-dependent transcription, initiation; IEA:InterPro.
 GO:0001711; P:endodermal cell fate commitment; IEA:Compara.
 GO:0080182; P:histone H3-K4 trimethylation; IEA:Compara.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEA:Compara.
 GO:0051571; P:positive regulation of histone H3-K4 methylation; IEA:Compara.
 GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IEA:Compara.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Compara.
 GO:0019827; P:stem cell maintenance; IEA:Compara. 

Interpro

 IPR004343; Plus-3.
 IPR018144; Plus3-dom_subgr. 

Pfam

 PF03126; Plus-3 

SMART

 SM00719; Plus3 

PROSITE

 PS51360; PLUS3 

PRINTS